KEGG   Parabacteroides johnsonii: LK449_13245
Entry
LK449_13245       CDS       T07907                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_13245
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pjo02022]
    LK449_13245
Two-component system [BR:pjo02022]
 NtrC family
  HydH-HydG (metal tolerance)
   LK449_13245
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 AAA AAA_2 HTH_28 AAA_22 Mg_chelatase HTH_50 AAA_16 bpMoxR HTH_30 HTH_29 DUF3931 HTH_23
Other DBs
NCBI-ProteinID: UEA89505
LinkDB
Position
complement(3196678..3198000)
AA seq 440 aa
MDKTKIIVVEDNIVYCEFVCNLLAREGFRTVQAFHLSTARKLLQQAADGDIVVSDLRLPD
GDGIDLLRWMRKEGMTQPFIIMTDYAEVHTAVESMKLGSLDYIPKQLVEDKLVPLLRTIL
KERNIGRSRMPVFARDGSAFQKIMHRIRLVAPTDMSVLIFGENGTGKEHIAHHLHDKSKR
SGKPFVAVDCGSLTKELAPSAFFGHVKGAFTGADSAKKGYFHEAEGGTLFLDEVGNLAPE
TQQMLLRAIQERRYRPIGDRADKSFNVRIIAATNENLEKAVNEKRFRQDLLYRLHDFEIT
VPPLRDCQEDIMPLAEFFREIANNELECNVIGFDGEARKTLLTHAWPGNVRELRQKIMGA
VLQAQTGLVTKEHLELAVTKPNSPVSFALRNDTEDKERILRALKQANGNRKVAAELLGIG
RTTLYSKLEEYGLKYKFQQP
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggataagacaaaaatcatcgtggtggaggacaacatcgtgtattgcgagtttgtctgc
aacctgctggcacgtgagggattccgtaccgtgcaggctttccacctctcgacagcgaga
aaacttctgcaacaagccgctgacggggatatagtggtttccgacctgcgcttacccgat
ggtgacggcatcgacttgttgcgttggatgcgcaaagagggtatgacgcagccgttcatc
atcatgaccgactatgccgaagtgcatacggcggttgaaagtatgaaactcggttcgctg
gactacatacccaaacaactcgtggaggacaaactcgtgcctctgctccgtaccatactg
aaagaacggaatatcgggcgaagccgtatgcccgtgtttgcccgtgacggttccgccttt
cagaaaatcatgcaccggataaggctggtagcccctaccgatatgagtgtactgatattc
ggtgagaatggcacgggcaaggagcatatcgcccaccatctgcatgataaaagcaaacgt
tccggcaagccattcgtggctgtggactgcggttcactcaccaaagagcttgcgccgtcg
gcattcttcggacatgtcaaaggcgcattcaccggtgcggacagtgccaagaaaggttat
ttccatgaggcggaaggtggtacgctgtttttggacgaagtgggtaatctcgcaccggaa
acccaacagatgcttctgcgtgccatacaagaacggcgataccgcccgataggtgacaga
gcggataagagttttaatgtccgtatcattgccgctaccaacgagaatctggaaaaggcg
gtcaatgagaagcgttttcgtcaggacttgctgtaccgtctgcacgatttcgagataacc
gttccgccattgcgtgactgtcaggaggacatcatgccgctggcggagttctttcgtgag
attgcgaacaatgaactggaatgtaatgttatcggctttgacggggaagctcggaagaca
ttgctgacccatgcttggccgggaaatgtccgtgagcttcggcagaaaatcatgggtgcg
gtgttgcaggcgcaaacgggacttgtcacgaaagaacatctggaacttgccgtaacaaaa
cctaactcccctgtcagcttcgcactgcgcaatgacacagaggataaggaacggatttta
cgtgcgttaaagcaggcaaacgggaaccgcaaggttgccgctgaattgctcggaatagga
cgtacaacactgtacagcaaactggaagaatatggattgaaatataaatttcagcaacca
tag

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