Parabacteroides johnsonii: LK449_14135
Help
Entry
LK449_14135 CDS
T07907
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjo03016
]
LK449_14135 (truB)
Enzymes [BR:
pjo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LK449_14135 (truB)
Transfer RNA biogenesis [BR:
pjo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LK449_14135 (truB)
Prokaryotic type
LK449_14135 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UEA89677
LinkDB
All DBs
Position
complement(3372008..3372721)
Genome browser
AA seq
237 aa
AA seq
DB search
MDFIAGEVVYFNKPLKWTSFDLVNKFRYKLSRKLKVKKIKVGHAGTLDPLATGVMIVCTG
KATKRIDEFQYQTKEYVATLKLGETTPSFDLEKEIDGVYPTEHITRKEVEKVLQSFVGTI
QQIPPVFSACKVDGKRAYELARKGEEVELKSKTLVIDEMELLECDLPVVKIRVVCSKGTY
IRALARDIGVALQSGAHLIALERTRIGDITLDKCMSPDDIDVFLDENITTEKKNCED
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggattttatagcaggagaagtagtatatttcaataagcccttaaagtggacttccttt
gacttggtgaacaaattccgctataagttatcgcggaaactgaaggtaaaaaagataaaa
gtgggacacgccggaacattggacccactggcgacaggggtaatgattgtttgtacgggc
aaggccaccaagaggatcgatgaatttcagtatcagacaaaggagtatgtcgctaccctg
aagttgggggaaacgacgccttcttttgatttggaaaaagagatagacggagtatatccg
acagaacatattacccgtaaggaagtagagaaggtactacagtcgttcgtgggaacgatt
cagcagattccaccggtgttttcggcttgcaaggtggatggtaagcgggcgtatgagttg
gctcgcaagggagaggaagtggaattgaagtccaagacgcttgtgattgatgaaatggag
ctgttggagtgtgatctgccagtggtaaagatacgggtggtttgcagcaagggtacttat
atccgcgctctggcacgtgatatcggtgtcgctcttcaatcgggcgctcatctgattgct
ctcgaacggactcgtatcggagacatcacactggacaaatgtatgtctcctgatgatatc
gatgtctttttagatgaaaatatcacaaccgagaagaagaattgtgaggattga
DBGET
integrated database retrieval system
