Parabacteroides johnsonii: LK449_14165
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Entry
LK449_14165 CDS
T07907
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjo03016
]
LK449_14165 (miaB)
Enzymes [BR:
pjo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LK449_14165 (miaB)
Transfer RNA biogenesis [BR:
pjo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LK449_14165 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UEA89683
LinkDB
All DBs
Position
complement(3380156..3381529)
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AA seq
457 aa
AA seq
DB search
MTNQENGVDLKSAAGMEEKKLFIETYGCQMNVADSEVVASIMKMDGYAVTDKIEDADAIF
VNTCSVRDNAEQKIYGRLQYFQSLKRKKKTLVIGVLGCMAERVKEELIEVHHADLVVGPD
SYMDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLGGVHISGFVSIMRGCNNFCTYCI
VPYTRGRERSRDIESILNEIRDMREKGFKEVTLLGQNVNSYLFEKEGEKISFPVLLKRVA
EEVPEMRVRFTTSHPKDMSDETLHVIAEHDNICKMIHLPAQSGSSRILKVMNRKYTREWY
LDRIAAIRRILPDCAISTDLFCGFHSETEEDYEETLSLMREVGYDSAFLFKYSERPGTYA
AQHLPDTVSEEEKVRRLQGMIDLQNRLSEESNKRDIGKVFEVLIEGFSKRSREQLFGRTS
QNKVVIFDKKNYHVGQFIKVRIHRASSATLFGDPVEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcaagagaatggcgtggacttaaaatccgcagccggaatggaagaaaagaag
ttgttcatcgaaacctacgggtgtcagatgaatgtggcagacagcgaagtcgtcgcttcc
atcatgaaaatggatggatatgcagtgactgacaagattgaagatgctgatgctattttt
gtcaacacttgttcggttcgcgataatgccgaacagaaaatctacggacggcttcagtat
tttcagtctttaaaaagaaagaaaaaaactttagtgatcggtgtgctcggatgtatggca
gagcgcgtgaaggaggaactgatcgaggtgcatcatgccgatttggtagttggccctgat
tcctatatggacttgccgaacctggtaggtgcggtcgaacacggagaaaaggcgatcaat
gttgagctttccacacaggaaacctacaaggatgtgatcccattgaaattaggaggtgtg
catatttcgggtttcgtctccatcatgcgcggatgtaataatttctgtacctattgtatc
gttccgtatacccgtggaagggaacgcagccgggatattgaaagtatcctgaacgagata
cgtgatatgcgtgaaaaaggttttaaggaggtgaccttgttagggcagaatgtaaactct
tatctctttgagaaagagggagagaaaatttcgtttcccgttttgctgaagcgtgtggcc
gaggaggtacctgagatgcgtgtccgctttaccacttctcacccgaaggatatgagtgac
gaaactctgcacgtgatcgccgagcatgataatatatgtaagatgatccaccttcctgca
caatcgggaagctctcgcatcctgaaagtgatgaatcgtaaatatacgcgtgaatggtat
ctggaccgtattgccgctatccgccgtatcttgccggactgtgctatatcgaccgacttg
ttttgcggtttccactccgagacggaagaagattatgaggaaacgctttccctgatgcgc
gaagtgggctacgacagcgcttttcttttcaaatattccgagcgtccgggaacttatgcg
gcccagcatcttcccgatacggtcagtgaagaagaaaaagtccgccgtctgcaaggcatg
atcgatttgcagaatcggctttcggaagaaagtaacaagcgtgatatcggcaaagtgttc
gaagtgttgatcgaaggtttctccaaacgttcgcgtgagcagttgttcggtcgtaccagt
cagaataaagtcgtgatttttgataagaaaaattatcatgtcggacaattcataaaagta
cgcatccaccgtgcctcttccgctactctgttcggagacccggtggaggaataa
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