Parabacteroides johnsonii: LK449_15315
Help
Entry
LK449_15315 CDS
T07907
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00300
Lysine biosynthesis
pjo00470
D-Amino acid metabolism
pjo00550
Peptidoglycan biosynthesis
pjo01100
Metabolic pathways
pjo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK449_15315
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK449_15315
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK449_15315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LK449_15315
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
LK449_15315
Enzymes [BR:
pjo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
LK449_15315
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
LK449_15315
Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
Precursor biosynthesis
Amino acid ligase
LK449_15315
Racemase
LK449_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
UEA89899
LinkDB
All DBs
Position
3663290..3665755
Genome browser
AA seq
821 aa
AA seq
DB search
MEYSIKEIAGIIGADAQKLYDAPVSILLTDSRRLSFPEQSLFFALQTKTNDGHNYIQGLY
KLRVRNFVVSTFLPEFESMPEANFLVVKDTLKALQKLAAHHRKRFNIPVIGITGSNGKTI
VKEFLYQLLHNEFNIVRSPRSYNSQLGVPLSVWQMSDKNTLGIFEAGISQPDEMERLQPI
IAPTIGVITNIGEAHQENFISSTQKCLEKLTLFNDCEAIIYDGDDAFIANCIESACLSHK
AITWSRTDSEAPLYIESIKKLDSETIIRCTLLGFDRTYTIPFTDDASIENAIHCMAVMLY
LKPTSVNDIEKFKRLEPVAMRLDVKQGINNCLLINDTYNSDINSLDIALDFQQSRRVEKN
LKCTLILSDILQSGTLPKSLYKKVADLVRRKKIDRIIGIGRDLKEYGGAFDIEKEFYLTT
DEFIKSPSFKKFKDELILIKGSRQFHFERISELLEKKVHETILEVNLDAVVHNFNYYRSK
LKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADEGEELRKEGISIPLIVMNP
EFSSFNVLFENQLEPEVYSFRLLDAMIKETERRGITSYPIHIKIDTGMHRLGFQPEDVPE
VCRRLKEQSGVVARSVFSHLVGSDSYIFDDFTKKQLDTFTRVAAELEAGLEYKVIKHILN
SAGIERFTDYQMDMVRLGIGLYGVSASGQKGLRNISTLKTTILQIQNVPAGDSIGYSRMS
YVKRDSRIAIIPIGYADGLDRHFSNGGGEVVINGHRCPIIGNICMDACMIDVTDTDAHEG
DSVIIFGEELPVSELSDKLKTIPYEILTSISPRVKRVYYRE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggaatattcaattaaagaaatcgccgggataattggagctgacgcccaaaaattatat
gacgctcctgtcagtatattgcttaccgacagccgccgtctttcattccccgaacaaagt
ctattctttgccctccagacaaagaccaacgacggacataattatatacaaggattatat
aaattacgtgtacgcaacttcgtagtcagcacttttttaccggagttcgaatcgatgcct
gaagcaaacttccttgtcgtcaaggatacactgaaagcactccagaagttagcggcccat
caccggaaacgtttcaatattccggtaatcggcattacgggaagcaacgggaaaacgatt
gtaaaagagtttctttatcaattattgcacaacgagttcaacatcgtccgctccccccgg
agctacaactcgcaattgggggttccgctgtcggtatggcagatgagcgacaaaaataca
ttaggcatcttcgaagcaggcatttcccagccggacgaaatggaacgccttcaaccgatc
atcgcaccaaccatcggcgtaatcacaaacataggggaagcgcatcaggagaactttatc
tcttccacgcagaaatgtctagaaaagctgacgttgttcaacgactgcgaagcaatcatc
tatgacggcgacgatgcttttatcgccaactgcatcgagtcggcctgcctgtcccacaaa
gcaatcacttggagtcggacagactcggaagcccctttgtatatcgaatcgatcaagaaa
ctggattccgaaaccattatccgctgcacgcttttaggtttcgaccggacatacacgatt
ccttttacggacgacgcttctatcgaaaacgccatccactgtatggccgtgatgttgtat
ctgaaaccgacaagcgtaaacgatatcgaaaaattcaagcgcctcgaaccggttgccatg
cgcttggacgtaaagcagggtatcaacaactgcctattgataaacgacacctacaattcg
gatatcaattctttggatatcgccctcgacttccaacagagccgccgcgtagagaagaat
ttaaaatgcacactaatcctttcagacatcctgcaatcgggaacgttaccgaagtctctt
tataagaaagttgcggacttggtgcgcagaaagaagatcgatcgcattatcggtatcggc
cgtgacttgaaagagtacggaggtgctttcgatatcgaaaaagaattttacctgacaacg
gatgaattcatcaagtctccgtctttcaaaaagttcaaagacgaattgattctgataaaa
ggctcccgccaatttcatttcgaacgtatatccgagctgctggaaaagaaagtgcatgag
acgatcttggaagtgaacctggatgccgttgtccataacttcaactattaccgctcaaag
ctgaagccagaaactaaaatggtctgcatggtcaaggctttcggatacggagccggttcc
tatgaactggcaaagacactgcaagaacatcgttgcgactacctggctgttgccgttgcc
gacgaaggagaagaactgcgcaaggaaggcatctcgatcccgcttatcgtcatgaatccg
gaattcagcagcttcaatgtcttgtttgaaaaccagctggagccggaagtgtacagtttc
cgtctgctcgacgcaatgataaaagagacggaacgcaggggcatcacctcttatccgatc
catatcaagatcgacacgggaatgcaccgtttaggcttccagccggaagatgtaccggag
gtttgccgtcgcctgaaagaacagagcggcgtagtagctcgctccgtattctcacatctc
gtaggcagcgactcctatatcttcgacgatttcacaaaaaagcaactggatacgttcacc
cgcgtggcagcagaactggaagccgggttggaatacaaggtgatcaagcatatcctgaac
tcggccggaatagaacggttcaccgattatcagatggatatggtacgtctcggcatcggc
ctgtatggagtcagtgcctccggtcagaaagggttgcgtaacatcagcacgctgaagacg
actatcttgcagatacaaaacgttccggcaggcgattccatcggctacagccggatgagc
tatgtaaagcgcgattcccgcatcgcgattatcccgatcggttatgccgacggcttggac
cgtcatttcagcaatggtggtggcgaggtcgtgattaatggccaccgttgcccgatcatt
ggcaatatctgtatggatgcctgcatgatcgatgtcaccgataccgacgcacacgaagga
gactccgtcatcattttcggcgaagaactccctgtcagcgaactttcggacaaactaaag
accatcccatacgagatacttacctctatctcgccgagggtaaaaagagtgtactacagg
gaataa
DBGET
integrated database retrieval system
