Parabacteroides johnsonii: LK449_15915
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Entry
LK449_15915 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_15915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_15915
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_15915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_10
HTH_40
HTH_11
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UEA90016
LinkDB
All DBs
Position
complement(3830159..3830773)
Genome browser
AA seq
204 aa
AA seq
DB search
MKNFTDEKTLLREIKNGNGEAFEFLFNSYYPRLRGYAARFVTDEEAVRDIIQESFLRFWE
KRDLIEAVSISSLLFAMVRNACLNYLKHLQLVEQHNLEHLDRVAGQEELYYWDFNLSPEY
TLLYKELQQQIRLVMNDLPSRCREVFEMSRFKKMKNREIADALQISTTAVEKHIAKALAR
FSAHFKDKYPLDVYIAILAWLLSE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttcacagacgagaagactctccttcgggagataaagaacggaaacggcgaa
gcattcgaatttctgttcaatagctattatcctcggttgcggggatatgctgctcgtttt
gtgacagatgaggaggcagtcagggatatcatacaggagagctttttgaggttttgggaa
aaacgtgatctgatagaagctgtttccatttcatctcttcttttcgcaatggtgagaaat
gcctgtctgaattatttgaaacatctacaactggtcgagcagcataacctggaacatttg
gatagggtggctgggcaggaagaactttattattgggactttaacctgagtccggaatat
acgcttctgtataaggaactgcaacaacagatccgtcttgttatgaatgatttgccctcc
cgttgccgtgaagtatttgaaatgagccgttttaagaaaatgaaaaaccgggagattgca
gatgctctccaaatatcgactactgcggtagagaaacatatagccaaagccttagcacgc
ttttccgcacattttaaagataaatatccgttggatgtctatatcgcgatactggcttgg
ctgctttccgaatga
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integrated database retrieval system
