Parabacteroides johnsonii: LK449_17275
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Entry
LK449_17275 CDS
T07907
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LK449_17275 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pjo03019
]
LK449_17275 (rnc)
03009 Ribosome biogenesis [BR:
pjo03009
]
LK449_17275 (rnc)
03036 Chromosome and associated proteins [BR:
pjo03036
]
LK449_17275 (rnc)
Enzymes [BR:
pjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LK449_17275 (rnc)
Messenger RNA biogenesis [BR:
pjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LK449_17275 (rnc)
Ribosome biogenesis [BR:
pjo03009
]
Eukaryotic type
90S particles
RNase
LK449_17275 (rnc)
Prokaryotic type
rRNA processing factors
LK449_17275 (rnc)
Chromosome and associated proteins [BR:
pjo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LK449_17275 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DUF3284
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UEA90274
LinkDB
All DBs
Position
complement(4218270..4219130)
Genome browser
AA seq
286 aa
AA seq
DB search
MFTKLYKRIRLLKNMNKEPYSSLYKILGFYPDNIHLYEQAFHHKSSSIESSDGRWLNNER
LEFLGDAILDAVVADIVFNHFQNKREGFLTNTRSKIVQRDTLNRVAVELGLEKMVVYSAK
VNSHNNYMYGNALEALIGAIYLDQGYEVCYNFIQNVLIKKYVNLETIARKEVNFKSSLIE
WSQKNKLEISFDLIESFTDNDGNPVFQTGVTLSDTQIGVGIGYSKKESQQSAAKMAIKKL
RTDKTFQQFISELKKKKTGENTADNEFEDLPEEAMAIEKGELKIEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacaaagctatacaaaagaataaggctcctcaagaacatgaataaggagccttat
tcttctttatacaagatactcggtttttatcccgataacatccacctttatgaacaagcc
ttccaccataaatcctcttccatagaaagcagtgacggcagatggctgaacaatgaacgg
ttggagtttttgggcgatgccatattggatgcggtcgtagccgacatcgttttcaaccac
tttcagaacaagcgggaaggtttcctgaccaatacccgctccaaaatcgtacagcgtgat
acactgaaccgcgttgccgtcgaactgggactcgaaaagatggtcgtgtattccgccaaa
gtaaactcccacaacaactacatgtatggaaatgcccttgaagcactgatcggtgcaatc
tatctggaccagggctacgaagtctgctataacttcatccaaaatgtgctcatcaagaaa
tatgtcaacctggaaacaatcgcccgtaaagaggtcaatttcaaatcgagcctgatcgaa
tggagccaaaagaacaagcttgaaatatcattcgacttgatcgaatcatttaccgataac
gacggaaacccggtgttccagactggcgtgacgctctccgacacgcagataggagtcggc
atcggctattcgaaaaaagaatcccagcaaagcgcagccaagatggcgatcaaaaagttg
cggaccgacaagacattccagcaattcatctcagagctcaaaaaaaagaaaaccggcgag
aacacagccgataacgagttcgaagacctacctgaagaagcaatggcaattgagaaagga
gaattgaaaattgagaattag
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