Parabacteroides johnsonii: LK449_17985
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Entry
LK449_17985 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_17985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_17985
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_17985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_38
HTH_40
HTH_24
HTH_23
UPF0122
HTH_20
HTH_10
PF0610-like_N
HTH_28
PhyR_sigma-like
DUF3562
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UEA90399
LinkDB
All DBs
Position
4397668..4398243
Genome browser
AA seq
191 aa
AA seq
DB search
MHETAIHSNTIEKLKRGSYEAFDTLYNMYADSLYGFALLHTKSVVQAEDIVQETFLKLWN
MRASLSVEGSFKSMLFTIAKNHVIDVFRRQINRPDFEDYIRFCEDENLLDNATVEKIYYD
DFIDKLALAKQKLTPAQRNIFEMSREEGMSNAEIAALSDISEQTVKNHLSAALKSLREEL
RKYNYLFVLFI
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaacagcgatacatagcaatactatagaaaaacttaaacgtggttcttatgaa
gcattcgatacattatataatatgtatgcggactctttgtacggtttcgccttactgcat
acgaaatctgttgtccaggcggaagatatcgtgcaggagacgtttctcaagctttggaac
atgcgtgcctccttgtctgttgaaggttctttcaaatccatgttgttcacgatagccaag
aaccatgtgatcgatgtttttcgccgacagattaaccgtccagattttgaagattacatt
cgcttttgtgaagatgagaacttactagataatgctacagtagaaaaaatatattatgat
gactttatcgacaagttagcgcttgccaagcaaaaactgactcccgcgcagcgaaacatc
tttgaaatgagccgtgaagaaggaatgagcaatgccgaaatagctgccctttcggatatc
tccgagcaaacggtaaaaaaccatttgtctgccgcattaaaatctctgcgcgaggagctc
cggaaatataattacttgtttgtcctttttatatag
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