KEGG   Parabacteroides johnsonii: LK449_18015
Entry
LK449_18015       CDS       T07907                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo03030  DNA replication
pjo03430  Mismatch repair
pjo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LK449_18015
   03430 Mismatch repair
    LK449_18015
   03440 Homologous recombination
    LK449_18015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pjo03032]
    LK449_18015
   03400 DNA repair and recombination proteins [BR:pjo03400]
    LK449_18015
Enzymes [BR:pjo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LK449_18015
DNA replication proteins [BR:pjo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LK449_18015
DNA repair and recombination proteins [BR:pjo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LK449_18015
SSDB
Motif
Pfam: RNase_T Rv2179c-like MSC
Other DBs
NCBI-ProteinID: UEA90405
LinkDB
Position
4409104..4409628
AA seq 174 aa
MERFAAIDFETANGKRSSICSIGIAIIEDNKVIDSIYTLVRPYPNFYTRFTTAVHGITMQ
DTIDSPDFEEVWSEIAGKLQDIPLVAHNSPFDEGCLRAAHEAYDLAYPKYQFYCTCRLSR
RMYPFLVNHQLQTVAAHCGYDLTYHHHAMADAYACAHIAATMMREKGVERLCDL
NT seq 525 nt   +upstreamnt  +downstreamnt
atggaacgttttgccgcaatcgactttgagactgctaatgggaaacgtagtagtatttgt
agtatcgggattgccattattgaggataataaggtgatcgattctatttacacgctggtc
cgtccgtatccgaacttctacacccggtttaccactgccgttcatggtataaccatgcag
gacacgatcgattctcctgactttgaggaagtttggtctgagattgccggcaaattgcag
gatattcctctggttgcccataacagcccttttgacgaaggttgcctgcgggctgctcac
gaagcctatgaccttgcctatcccaaatatcagttctattgtacctgccgcttgtcaagg
cgcatgtatcctttcttggtcaaccaccaactacagactgttgccgctcattgtggatac
gatctgacctatcatcaccatgcaatggccgatgcttatgcctgtgcgcatatcgcggca
accatgatgcgggaaaagggagtcgaaaggctgtgtgatttatga

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