Parabacteroides johnsonii: LK449_18610
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Entry
LK449_18610 CDS
T07907
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LK449_18610 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pjo01007
]
LK449_18610 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjo03016
]
LK449_18610 (trpS)
Enzymes [BR:
pjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LK449_18610 (trpS)
Amino acid related enzymes [BR:
pjo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LK449_18610 (trpS)
Transfer RNA biogenesis [BR:
pjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LK449_18610 (trpS)
Prokaryotic type
LK449_18610 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF5301
DUF7222
Motif
Other DBs
NCBI-ProteinID:
UEA90519
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All DBs
Position
4562473..4563525
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AA seq
350 aa
AA seq
DB search
METVVSGIRPTGNLHLGNYFGAVKGFLQMQNEYNCFFFIADWHSLTTHPHPDNIRNSVKT
ILAEYLACGIDPEKATIYLQSDVREIPELYLYLNMNAGIGELMRTTSFKDKARQQLHIDR
VNTTEGDVEKEIFNEGNKHSVSAGLLTYPTLMAADIIIHKAVKVPVGKDQEQNMEMARRF
ARRFNATYGVECFPEPASFYYSSKAIKVPGLDGSGKMGKSEGNAIYLIDDEKTIKKKVMK
AVTDAGPTEPNSVKPEPIANLFTMMEIVSTKDTFDFFNEKYNNCEIRYGDLKKQLAEDIN
NFCAPIRERILDIRSNEDYLAKVARMGAEKASESAAKTLREVREIIGFRG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagtagtaagtggcattcgcccaacgggtaatttgcatctggggaattacttc
ggagcagtaaaaggatttttgcaaatgcaaaatgagtataattgctttttctttattgca
gactggcactcgttgactacacatccgcatcccgataatatccgtaatagtgtaaagaca
attctggctgaatatctggcttgcggcatcgacccggaaaaagcgaccatctatctgcag
agcgatgtgcgcgaaattcccgaactgtatctgtatttgaatatgaatgcggggatcggt
gagttgatgcgtactacttctttcaaggataaggcgcgccagcagctgcacattgaccgt
gtcaacaccacagaaggcgatgtggaaaaggaaattttcaacgaggggaacaaacatagc
gtaagcgctggtttgctgacctacccgactctgatggcagccgatatcattatccataag
gcagtgaaggtgccggttgggaaagaccaggagcagaatatggaaatggcccgccgtttt
gcccgccgttttaacgcgacttacggagtcgaatgtttcccggaacctgcctctttctat
tattccagtaaggcgatcaaagtgcccggattggacggatccggcaagatgggaaagagc
gaaggaaatgcgatctacctgattgacgatgaaaagacaatcaagaagaaggtgatgaaa
gctgtgacggatgccggtccgacggagccgaacagtgtgaaacctgagccgattgccaat
ctgtttacgatgatggagatcgtatcgacgaaagatactttcgatttcttcaatgagaaa
tacaacaattgcgagatccgttacggagatttgaaaaagcaattggctgaagacatcaat
aatttctgcgccccgattcgcgaacgtattttggacattcgttccaacgaagactatttg
gcgaaagtagcccgtatgggggccgaaaaagcaagcgagagcgctgcgaaaacgttgcgt
gaagtgcgcgagattatcggattcagaggataa
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