Pseudoxanthomonas japonensis: LAG73_03220
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Entry
LAG73_03220 CDS
T07964
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp00521
Streptomycin biosynthesis
pjp00523
Polyketide sugar unit biosynthesis
pjp00525
Acarbose and validamycin biosynthesis
pjp00541
Biosynthesis of various nucleotide sugars
pjp01100
Metabolic pathways
pjp01110
Biosynthesis of secondary metabolites
pjp01250
Biosynthesis of nucleotide sugars
Module
pjp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LAG73_03220 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LAG73_03220 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LAG73_03220 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LAG73_03220 (rfbB)
00525 Acarbose and validamycin biosynthesis
LAG73_03220 (rfbB)
Enzymes [BR:
pjp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LAG73_03220 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
NAD_binding_4
DUF6301
Motif
Other DBs
NCBI-ProteinID:
UBB26115
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All DBs
Position
684315..685370
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AA seq
351 aa
AA seq
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MTTWLVTGGAGFIGGNFVLRAVADGIRVVNLDALTYAGNLDTLSSLAGDANHVFVKGDIG
DSRLVASLLAEHRPEAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDHWRSLPD
GERERFRFLHVSTDEVYGSLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPT
LTTHCSNNYGPYHFPEKLIPLIIQRALAGEPLPVYGDGQHVRDWLFVGDHCSAIRDVLLR
GRAGEAYNVGGNAERRNLDVVETICRLLDERHPRADGKPRSSQIRFVADRPGHDRRYAID
ASKLRDELGWEPQHTFEQGIAETVDWYLANQDWVNRVLDGSYRLERIGTAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatggctggtaaccggcggggccggtttcatcgggggcaacttcgtgcttcgt
gccgttgccgatggcatccgggtggtcaatctcgatgcactgacctacgccggcaacctg
gacacgctttcctcgctggcaggcgatgccaaccatgtcttcgtaaagggcgacatcggc
gattcgagactcgttgcgtccctgttggcggaacatcggcccgaagccgttctgaacttt
gccgccgagagccacgtggatcgttcgatagacggacccggcgccttcatccagaccaac
gtggtcggcaccctgggcctgctggaagccgtgcgtgatcattggcgttcgctgcccgac
ggggagcgggagcgtttccgcttcctgcatgtgtccaccgacgaggtctatggttcgctg
ggtgaaacgggaaaattcaccgaaaccacgccatatgcgccgaattcgccctattcggcc
tcgaaggccgcatcggatcacctggtgcgcgcattccatcacacctatgggttgccaacc
ctcaccacccactgctccaacaactatggcccttaccatttccccgagaaactgatcccc
ctgatcatccagcgtgcactggcgggtgaacctctgccggtctacggtgatggccagcat
gtccgggattggctgttcgtcggcgaccattgctcggccatccgcgatgtcctgttgagg
ggaagggcgggcgaggcctacaacgttggcgggaacgcggagcgccggaatctcgacgtg
gtggaaaccatctgccgtctgctcgacgagcgtcatccacgggccgatggcaagccgcgc
agcagccagatcagattcgtggcggaccgccccgggcacgatcgccgctatgccatcgac
gcatccaaattgcgcgacgaattggggtgggaaccgcagcacaccttcgaacagggcatc
gccgaaaccgtggactggtacctggcgaaccaggattgggtgaatcgcgtgctggacggg
agttatcgtctggaacgcatcggcaccgcagcttga
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