Pseudoxanthomonas japonensis: LAG73_03475
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Entry
LAG73_03475 CDS
T07964
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAG73_03475 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_03475 (uvrB)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAG73_03475 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAG73_03475 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
UBB26162
LinkDB
All DBs
Position
738908..740923
Genome browser
AA seq
671 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPQAIRKLVENFESGLAKQTLLGVTGSGKTYTVANVVQAVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKALLSRPDALVVATVSAIYGLGAPEDYLSLRLILSLGEHMDQRQLIKHLTELQ
YTRNEYELQRGTFRVRGEVIDVHPAESDSEALRIELFDGDVENLTLFDPLTGETLRKLQR
YTVYPKTHYATTRDRVLTAIDTIKIELKERLELLYAQNKLVEAQRLAQRTQFDLEMMAEV
GYCSGIENYSRHLTGKAPGEPPPTLFDYLPADALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEERSPRSIYVSATPGPYELRESNGEIVELVVRPTGLVD
PEVEIRPVGTQVDDLLSEINLRVSWGDRVLVTTLTKRMAENLTEYLGEHGVKVRYLHSDV
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETSRRREKQLEYNVEHGITPKSVAKPIVDILEGA
RSDAGEAKAGRGKRKVAEERAEYAVLDPAQAVARIKTLEQQMYQHARDLEFEDAARLRDE
IRKLKEASLAG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgcttccagctcgtttcaccttactctccggccggcgatcagccgcaggcc
atccggaaactcgtggagaatttcgaatccggcctcgccaagcagaccctgctgggcgtg
accggttccggcaagacctacaccgtcgccaacgtggtccaggcggtacagaaaccgacc
ctggtgatggcgccgaacaagaccctggcggcgcagttgtacggcgagttcaagtcgttc
ttcccgcacaacgcggtggaatacttcgtcagctactacgactactaccagcccgaagcc
tacgtgccgtcgtcggataccttcatcgagaaggacagctcgatcaacgagcacatcgaa
cagatgcggctgtcggcgaccaaggcgttgctgtcccgtcccgacgcgctggtggtggcc
acggtctcggcgatctacggcctcggcgcgcccgaggactatttgtcgctgcgcctgatc
ctgtcgctgggcgagcacatggaccagcgccagctgatcaagcacctgaccgagctgcaa
tacacccgcaacgagtacgaactgcaacgcggcaccttccgggtgcggggcgaggtcatc
gacgtgcatccggccgaaagcgacagcgaggcgctgcgcatcgaattgttcgacggcgac
gtggagaacctgaccctgttcgacccgctgaccggcgagaccctgcgcaaactgcaacgc
tacacggtctatccgaagacccactacgcgaccacccgcgaccgcgtgctgaccgccatc
gacaccatcaagatcgagttgaaggagcggctggagctcttgtacgcgcagaacaagctg
gtcgaggcgcagcggctggcccagcgcacccagttcgacctggagatgatggccgaggtc
ggctactgctcgggcatcgaaaactactcccgccacctgaccggcaaggcgcccggcgag
ccgccgccgacgctgttcgactacctgccggccgacgcgctgctggtcatcgacgaatcg
cacgtgaccattccgcagatcggcgccatgtacaagggcgatcgctcgcgcaaggagacc
ctggtcgagttcggtttccgtctgccgtcggcattggacaaccggccgctgcggttcgag
gagtgggaagagcgctcgccgcgcagcatctacgtgtcggccacgccgggaccctacgaa
ctgcgcgagtccaacggcgaaatcgtcgaactggtggtgcgcccgaccggcctggtcgat
ccggaagtggaaatccgtccggtcggtacccaggtcgacgacctgctgtcggagataaac
ctgcgcgtgtcctggggcgatcgtgtgctggtcaccaccctgaccaagcgcatggccgag
aacctcaccgagtatctcggcgagcacggcgtgaaggtgcgctacctgcactcggacgtg
gacacggtggagcgggtggaaatcatccgcgacctgcgtctgggcaagttcgacgtgctg
gtcggcatcaacctgctgcgcgaaggcctggatatgccggaagtgtcgctggtggcgatc
ctggatgccgacaaggagggcttcctgcgttcgaccggctcgctgatccagaccatcggc
cgcgccgcccgcaacctgcgcggcaaggccatcctgtacgcggacaagatgacccgttcg
atgcaggcggcgatcgacgaaaccagccgccgccgggaaaagcagctggagtacaacgtc
gagcacggcatcacccccaaatcggtggccaagccgatcgtcgacatcctggagggtgcg
cgcagcgacgcgggcgaggccaaagccggacgcggcaagcgcaaggtcgccgaggagcgc
gccgagtacgccgtcctggacccggcccaggcggtggcccggatcaagacgctggagcag
cagatgtaccagcacgcccgcgatctggagttcgaggatgccgcccgcctgcgtgacgag
atccgcaagctcaaggaggccagcctggccgggtga
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integrated database retrieval system
