Pseudoxanthomonas japonensis: LAG73_03995
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Entry
LAG73_03995 CDS
T07964
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03030
DNA replication
pjp03430
Mismatch repair
pjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAG73_03995 (dnaE)
03430 Mismatch repair
LAG73_03995 (dnaE)
03440 Homologous recombination
LAG73_03995 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjp03032
]
LAG73_03995 (dnaE)
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_03995 (dnaE)
Enzymes [BR:
pjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAG73_03995 (dnaE)
DNA replication proteins [BR:
pjp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAG73_03995 (dnaE)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAG73_03995 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UBB26258
LinkDB
All DBs
Position
complement(856421..859984)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSSRFVHLHLHTEFSMADSIIRVPEKPDQADPKKAKQANLLSRAVELRMPALAVTDRNNL
FALVKFYKAAESVGIKPIAGADVLVAEGNETPWPVTLLCRDREGYLSLSRLLTRAWMEGH
RNDGVAIDPQWLHEDRQGLFALMGRQSQAGRLALSGRHELAEQHLAEWQRSFGEDLHLEL
TRTQRDGEEAFNAFALHASAKRGLPVIASNDVRFLSPDGFDAHEARVCIASGRVLDDPKR
PREYSPEQYMKSAEEMAALFADVPDAIDNTLALAQRCNIEMRLGTYFLPAYPVPENETLD
SWIRSQARTGLEERLEKNPLAPGKSREDYFERLEFELDTIIKMGFPGYFLIVGDFIQWGK
NHGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDRRD
EVIDYVARKYGRDRVSQIITYGTMAAKAVVRDAGRVLGFPYGLVDGVAKLIPNILGVTLK
DAMGEGNSEMASQELIERYNSEDDVRDLIDLARQLEDLTRNAGKHAGGVVIAPSPLSDFC
PLFAEHDEGMLGRNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINRRHERAGVP
PIDIATIPLDDAATYRQVFASGNTGAVFQFESSGMRRLLKDAKPDRFEDLIALVSLYRPG
PMDLIPSFVDRKHGREEVEYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGAYSLGGADLL
RRAMGKKVPAEMAKHREIFREGAGKGGVDEKKADEIFDLMEKFAGYGFNKSHAAAYALVS
YQTAWLKCHYPAEFMAAVLSSDMDNTDKVVGFLDEARGLSLTVLPPEINHSDYMFEATDP
RTIRYGIGAIKGVGQGLCETIVAERRQGGEFRDLLDFCKRVDSSKLNRRALEAMVNAGAL
DALGRNRASLMLQLPEVLKATDQLAKERAAGQSSLFGGGDAAPALEVVLTESDEWPLSQL
LNGERETLGHYLSGHPMDPYREDLRALVGSDLGDLEKLWSNQSPGEKKGWRPEVSALIAG
QVVGVRRKGDSQVFVQLEDGRGRIECSAFSDAMAEFGPLLTRDRILIMKGGLREDEFNGG
FSLRIRQCWDYSQLCAQQAQRLSLRLDLREPGLWSRVEALLARHRPGNTPLRLDLVLPSG
KSATAGMLDVNGSLSVRVDTELVDALRATPGVRAVKLAVGRPWAQNH
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgcttcgttcatctccacctgcacaccgagttctcgatggcggattcgatc
atccgcgtgcccgagaagccggatcaggccgaccccaagaaagccaagcaggccaacctg
ctcagccgcgcggtggaactgcgcatgccggcgctggcggtcaccgatcgcaacaacctg
ttcgccctggtcaagttctacaaggccgccgaaagcgtcggcatcaagccgatcgccggc
gccgacgtgctggtggccgagggcaacgagacgccgtggccggtgaccctgctgtgccgg
gatcgcgagggctacctgtcgttgtcgcgcctgctcacccgcgcgtggatggaaggtcac
cgcaacgacggcgtcgccatcgatccgcagtggttgcacgaggatcgccagggcctgttc
gcgttgatgggccgccagagccaggccggccggctggcgctgagcggacggcatgaactg
gccgagcagcacctggccgaatggcagcgcagtttcggcgaggatctgcatctcgaactg
acccgcacccagcgcgatggcgaggaggcgttcaacgcattcgcgctgcacgcttcggcc
aagcgcggcctgccggtcatcgccagcaacgacgtgcggttcctttcgccggacggattc
gacgcgcacgaggcgcgcgtgtgcatcgcctccggccgcgtgctggacgacccgaagcgg
ccccgcgagtacagtcccgagcagtacatgaagtcggccgaggaaatggccgcgctgttc
gccgacgtgcccgacgccatcgacaacacgctggcgctggcgcagcgctgcaacatcgag
atgcggctgggcacctacttcctgcccgcctatccggtgccggaaaacgagaccctggac
agctggatccgcagccaggcccggaccggcctggaagaacggctggagaagaacccgctc
gcccccggcaagtcccgcgaggattacttcgaacggctggagttcgagctggacaccatc
atcaagatgggcttccccggctacttcctgatcgtgggcgacttcatccagtggggcaag
aaccacggcatcccgatcggcccgggccgcggttcgggcgccggttcgctggtggcgtgg
gcgctgaagatcaccgatctggatccgctgccctacaacctgctgttcgagcgcttcctc
aatccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccggcgcgac
gaggtgatcgactacgtcgcgcgcaagtacggccgcgaccgggtcagccagatcatcacc
tacggcaccatggcggcgaaggcggtcgtgcgcgacgccggccgcgtgctgggctttccc
tacggtctggtcgatggcgtcgccaagctgatcccgaacatcctcggcgtgacgctgaag
gatgcgatgggcgaaggcaacagcgaaatggcctcgcaggagctgatcgaacgctacaac
agcgaggacgatgtccgcgatctgatcgacctggcgcgccagttggaagacctgacccgc
aacgccggcaagcacgccggcggcgtggtcatcgcgccgtcgccgctgtcggacttctgc
ccgctgttcgccgaacacgacgagggcatgctgggccggaacccggtcacccagttcgac
aagaacgacgtcgaggaagtcggcctggtgaagttcgacttcctgggcctgcgcacgctg
accatcatcgactgggcggtcaaggccatcaaccgccgccacgaacgcgcgggcgtgccg
ccgatcgacatcgcgacgattccgctggacgacgccgccacctatcgccaggtgttcgct
tccggcaacaccggcgcggtgttccagttcgaatcctccggcatgcgccggctgctgaag
gacgccaagcccgaccgcttcgaggatctgatcgcgctggtatcgctgtaccgacccggc
ccgatggacctgattcccagcttcgtcgaccgcaagcacggacgcgaggaagtcgagtat
cccgatccgcgcaccgaagcaatcctgaaggacacctacggcatcatggtgtaccaggag
caggtgatgcagatggcgcagatcgtcggcgcctactcgctcggcggcgccgacctgctg
cgtcgcgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgagatcttccgc
gagggcgccggcaagggcggcgtcgacgagaagaaggccgacgaaatcttcgacctgatg
gagaagttcgccggctacggtttcaacaagtcgcacgccgcggcctacgcgctggtgtcg
taccagaccgcgtggctgaagtgccactatccggccgagttcatggccgcggtgctgtcc
tcggacatggacaacaccgacaaggtggtcggtttcctggacgaggcgcgcgggctgtcg
ctgaccgtgctgccgccggagatcaaccactcggactacatgttcgaggcgaccgatccg
cgcaccatccgctacggcatcggcgccatcaagggcgtcggccagggcctgtgcgagacg
atcgtcgccgaacgccggcagggcggcgaattccgcgacctgctggatttctgcaaacgg
gtcgattcctccaagctcaaccggcgcgcgctggaagcgatggtgaatgccggcgcgctt
gacgcgctgggccgcaatcgcgcctcgctgatgctgcagttgcccgaagtgctgaaggcc
accgatcagctggccaaggagcgcgcggccggacaaagctcgctgttcggcggcggcgat
gccgcgcccgcgctggaagtggtgctgaccgaatcggacgagtggccgctgagccaattg
ctcaatggcgagcgcgagacgctggggcactacctcagcggccatccgatggatccctat
cgcgaggatctgcgcgccctggtcggcagcgacctgggtgatctggaaaaactctggagc
aaccagtcgccgggcgaaaagaagggctggcgcccggaagtcagcgcgctgatcgccggc
caggtggtcggcgtgcgccgcaagggcgacagccaggtgttcgtgcaactggaggacggc
cgcggccgcatcgaatgcagtgcgttctccgacgcgatggccgagttcggcccgctgctg
acccgcgaccgcatcctgatcatgaagggcggcctgcgcgaggacgagttcaacggcggc
ttcagcctgcgcatccgccagtgctgggactactcgcagctgtgcgcgcagcaggcgcag
cggctgtcgctgcggctggacttgcgcgaaccggggctgtggtcgcgggtggaagccctg
ctcgcccgccaccgccccggcaacacgcccctgcgcctggatctggtgctgccctccggc
aagtcggccaccgccggcatgcttgacgtcaatggcagcctgtcggtgcgggtcgatacc
gaactggtcgacgcgctgcgggccacccctggcgtgcgcgcggtcaagctggcggtgggc
cgcccctgggcgcagaaccactga
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