Pseudoxanthomonas japonensis: LAG73_05220
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Entry
LAG73_05220 CDS
T07964
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pjp
Pseudoxanthomonas japonensis
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjp03016
]
LAG73_05220 (truB)
Enzymes [BR:
pjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAG73_05220 (truB)
Transfer RNA biogenesis [BR:
pjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAG73_05220 (truB)
Prokaryotic type
LAG73_05220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Big_6
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UBB26487
LinkDB
All DBs
Position
1123524..1124471
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AA seq
315 aa
AA seq
DB search
MPPKIRFRPLDGLLLLDKPQGLSSNAALQAARRLFRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSRKAYETTAVLGVTTDTDDADGAVLRERPVPTLAPADLETALAPLRGSIR
QRAPIYSALKQGGEPLYAKARRGEAIEAPEREVEVHAIEVLAAEGDRIRLRVECGSGTYV
RSLVRDLGEALGCGAHVAELRRLWVEPFLAPRMYTLEALDALAGTGEAALLGALLPVEAG
LAGFPRRDLDADGARRFGMGQRLRGQGEPAEMVAVRGPEGRVLGLGSVDGEGLLVPQRLF
SWAVRNAPSAARPKH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaagattcgcttccgtccgctggatgggctgctgctgctggacaagccgcag
ggcctcagctccaacgccgccctgcaggccgcgcggcgcctgttccgcgcggagaagggc
gggcacaccggcagcctggacccgctcgccaccggactgctgccgctgtgtttcggcgag
gccaccaagatcgccggcctgctgctgggctcgcgcaaggcctacgagaccaccgcggtg
ctgggcgtgaccaccgatactgacgacgccgacggcgcggtcctgcgcgaacggccggtg
ccgacgctggcccccgccgatctggagaccgccctggcaccgctgcgcgggtcgatccgc
cagcgcgcgcccatctactcggcgctcaagcagggcggcgagccgttgtacgccaaggcc
cgccggggcgaagccatcgaggcgcccgagcgcgaggtcgaggtccatgccatcgaggtg
ctggccgccgaaggcgaccggatccggctgcgggtcgagtgcggttccggcacctatgtg
cgcagcctggtgcgcgacctgggcgaggcgctgggctgcggcgcccacgtcgccgagctg
cgccggctatgggtcgagccgttcctggccccgcgcatgtacaccctggaggcgctggat
gcgctggccgggacgggggaagcggcgctgctgggcgccctgctgccggtcgaggccggc
ctggccggattcccccggcgcgacctggacgccgacggcgcgcgccgtttcggcatgggc
cagcgcctgcgcgggcagggtgaaccggcggaaatggtggccgtgcgcgggcccgaggga
cgtgtgctgggcctgggcagcgtcgacggcgaggggctgctggtcccccagcgtctgttc
agctgggcggtccgcaacgctccgtcggcggcgcggcccaaacattaa
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integrated database retrieval system
