Pseudoxanthomonas japonensis: LAG73_05995
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Entry
LAG73_05995 CDS
T07964
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pjp
Pseudoxanthomonas japonensis
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pjp03009
]
LAG73_05995
Enzymes [BR:
pjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LAG73_05995
Ribosome biogenesis [BR:
pjp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LAG73_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
UBB26629
LinkDB
All DBs
Position
complement(1276451..1278085)
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AA seq
544 aa
AA seq
DB search
MSNTPRNKLSLKRDAAAEAPANKLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGETAQ
VGMSVKSGDKIELDGRQFVASALTEPARVLMYNKPEGEVTTREDPEGRPTVFEALPVLKG
ARWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGQETVPDNIVDR
LHRGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRY
GRISLPQPLLRGQSQELSDAQVEALRKELGLEDGAPAALTLQPVIGQRRAAKSTVHVSRE
GRSQGYVNGHNTADEGRELRRFDHVREDRGRGRGKKPHGGLTVSGEAAAKQAQKPFKQRK
MKGPKPLPDGNPAAFRSWYVPEGVDTGPTGHRNAGPGRKGPGGGGAGKRGGNRPQGGAGF
GNEYGGFGGESRGPRGPRGPGGGGAGGGAGKPQRAARPYGHPGNAPSFPSDHATPGGFSP
YGQPRGPRPQGGRPGGGGNRPQNAGPRPGGRPGGGRPAGGRGPGGRPGGGGNRPRGGGGG
GHHG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataccccccgcaacaaactgtcgctcaagcgcgacgccgccgccgaagccccc
gccaacaagctggaggagcgcctgcacaaggtgctggcgcaggccggactgggctcgcgc
cgcgcgctggagcaacgcatcgccgacggcctggtcaaggtcaacggcgagaccgcccag
gtcggcatgagcgtcaagagcggcgacaaaatcgaactcgatggtcgccagttcgtcgcc
agcgcgctgaccgaaccggcgcgcgtgctgatgtacaacaagcccgaaggcgaagtgacc
acccgcgaggatcccgaaggccgtccgaccgtgttcgaggcgctgccggtcctcaagggc
gcgcgctggatcgccatcggccgcctggacatcaacaccaccggcctgctgctgctgacc
accgacggcgaactcgccaacgcgatgatgcatccgtcctacgaggtcgagcgcgaatac
gtggtgcgcgtgcgcgccccggaaggccaggaaaccgtaccggacaacatcgtcgatcgc
ctgcatcgcggcgtcgcgctggaagacggtccggccaagttcgatgaaatcgaacgcatc
ggcggcaccgattcgcacgactggttccgcgtggtggtcaaggaaggccgcaatcgcgaa
gtgcgccgcctgtgggaatcgcagggctgccaggtcagccggctcaagcgcacccgctac
ggccgtatctcgctgccgcagccgctgctgcgcggccagtcgcaggaactgtccgacgcc
caggtcgaagcactgcgcaaggaactgggcctggaagacggcgcgcccgccgcgctgacg
ctgcaaccggtgatcggccagcgccgcgccgccaagtccaccgtgcacgtctcgcgcgaa
ggccgcagccagggttacgtcaacggccacaacaccgccgacgaaggccgcgaactgcgt
cgcttcgatcacgtgcgcgaggatcgcggccgtggtcgcggcaagaagccgcacggcggc
ctgacggtcagcggcgaagccgccgccaagcaggcgcagaagccgttcaagcagcgcaag
atgaagggtcccaagccgttgccggatggcaatccggccgcgttccgcagctggtacgtg
ccggaaggcgtcgataccggtccgaccgggcaccgcaacgccggtcccggccgcaagggt
ccgggcggcggcggtgccggcaagcgtggcggcaaccgtccgcagggcggtgccggcttc
ggcaacgaatacggcggcttcggcggtgaatcgcgtggcccgcgcggtccgcgtggtcct
ggcggcggcggtgcgggcggtggtgccggcaagccgcagcgtgcggcacgtccgtacggc
caccccggcaacgcaccgagcttcccctccgatcacgccacgcccggtggcttcagcccg
tacgggcagccgcgtggtccgcgcccgcagggtggtcgtcccggcggcggcggcaaccgt
ccgcagaacgccggcccgcgtccgggtggccgtcccggcggtggtcgtccggccggtggc
cgcggtccgggcggtcgtcccggcggcggtggcaatcgcccgcgcggcggcggcggcggc
ggtcatcacggctga
DBGET
integrated database retrieval system
