Pseudoxanthomonas japonensis: LAG73_06780
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Entry
LAG73_06780 CDS
T07964
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03410
Base excision repair
pjp03430
Mismatch repair
pjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAG73_06780 (recJ)
03430 Mismatch repair
LAG73_06780 (recJ)
03440 Homologous recombination
LAG73_06780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_06780 (recJ)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LAG73_06780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAG73_06780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LAG73_06780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UBB26777
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Position
1470059..1471783
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AA seq
574 aa
AA seq
DB search
MTPSPRIRRREAVVAGEWPAQILPLLRRVYAGRGVSAAAGAQPRLAQLLPPDALGGLDAA
GRLLQAAIDEGRHIVVVGDFDCDGATACALMVRGLRALGAARVTATVPNRMAHGYGLSPS
LVDELATLQPELLVTVDHGIACHAGIARARAQGWQVLVTDHHLPGETLPPADAIVNPNLR
EDGFPSKALAGVGVAFYVLLALRRRLRESGRWPQGEPDLTPLLDLVAVGTVADLVPLDSN
NRALVGAGLRRLRGGQGSAGLHALIEVAGRDARHLTASDIGFAIAPRLNAAGRLEDMSLG
IECLLCDDLEQARGMAATLNEINAERRGVQQQMVDEAQIALAKLAAVEAEPPLALCLFDP
EWHPGVVGLVASRIKDGLHRPVIAFAPAEPGATSLRGSARSIPGFHMRDALAAVDATHPG
LIEKFGGHAMAAGLSLAQANLAAFEVAFRDVATRWLDDSLLQAEWLSDGELLPEEFDRAH
AEALRDGGPWGQGFPEPLFDGEFEVIDWRVVGAKHLKFSLRLPGRAQPLGAIQFGGWREQ
ARPRRVHAVFQLDTDDYQDRRGIQLLVRHWVALP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccttcgccccggatccgccggcgggaagcggtggtcgccggcgaatggccggcg
cagatcctgcccttgctgcgacgcgtgtacgccggccgtggtgtcagtgccgccgccggg
gcgcagccgcgcctggcgcaactgctgccccccgatgcgctcggcggccttgatgccgcc
ggccgcctgctgcaggcggccatcgacgaaggccggcacatcgtggtggtcggcgatttc
gattgcgacggcgcgaccgcgtgcgccttgatggtgcgaggcttgcgcgcgttgggcgcg
gcgcgggtcaccgcgacggtgcccaaccggatggcgcatggctacggcctgtcgccctcg
ctggtggacgaactggcgacgctgcaacccgaactgctggtcactgtcgaccacggcatc
gcctgccatgcgggcattgcgcgcgcgcgcgcgcagggctggcaggtgctggtgacggat
caccatctgcccggcgagacgctgccgccggccgatgccatcgtcaatcccaatctgcgc
gaggacggcttccccagcaaggcgctggccggggtgggcgtggccttctacgtgctgctc
gcgctgcgtcgccgtttgcgcgaaagcggccgatggccgcagggcgaaccggacctgacc
ccgctgctggatctggtcgcggtcggcacggtggcggatctggtgccgctggacagcaac
aaccgggccctggtcggcgccggcctgcggcgcctgcgcggcgggcagggcagcgcgggc
ctgcacgccctgatcgaggtcgccggccgcgatgcccgccatctgaccgcgtccgacatc
ggtttcgcgatcgcgccacggctcaatgccgccggacgcctggaggacatgtcgctgggc
atcgaatgcctgctctgcgacgacctggagcaggcgcgcgggatggccgccaccctcaac
gaaattaacgccgagcggcgcggcgtccagcagcagatggtcgacgaggcgcagatcgcg
ctggcgaagctcgcggcagtggaagccgaaccgccgctggcgctgtgcctgttcgatccc
gagtggcatcccggcgtggtcgggctggtcgcttcgcggatcaaggatggcctgcatcgc
ccggtcatcgccttcgcgcccgccgagcccggcgcgacttcgttgcgcggttcggcgcgt
tcgattcccggcttccatatgcgcgacgcgctggcggcggtcgatgcgacgcatccgggc
ctgatcgagaaattcggcggccacgcgatggccgccggcctgagcctggcgcaggcgaac
ctggcggccttcgaagtcgcgttccgcgacgtcgccacgcgctggctggacgacagcctg
ctgcaggccgaatggctgagcgacggcgaactgctgccggaagagttcgaccgcgcccac
gccgaggcgctgcgcgacggcgggccctggggacagggctttcccgagccgttgttcgac
ggcgagttcgaggtgatcgactggcgcgtggtcggcgcgaaacacctgaagttctcgctg
cgcctgcccgggcgcgcgcagccgctgggcgccatccagttcggcggttggcgtgaacag
gcaagaccgagacgcgtccacgccgtctttcagctcgacaccgacgactaccaggatcgc
cggggaatccagttgctggtccgccactgggtggcgctgccgtag
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