Pseudoxanthomonas japonensis: LAG73_09210
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Entry
LAG73_09210 CDS
T07964
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pjp
Pseudoxanthomonas japonensis
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjp03016
]
LAG73_09210 (thpR)
Enzymes [BR:
pjp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LAG73_09210 (thpR)
Transfer RNA biogenesis [BR:
pjp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LAG73_09210 (thpR)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UBB27232
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All DBs
Position
complement(2044443..2045021)
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AA seq
192 aa
AA seq
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MANHQGDLFGGPSPPLHRLFFALLPSASERMQVAGIVDGLRASHPHTRWVNPERYHLTLH
YLGESSGPREDWIARAREAAEGFSGEAFHLQLDHLLPLGNPRRPALTLAAFSSSTELLRF
WRGLQERLIRAGFKDHVGRSFVPHLTLGYSEPGPATPAVASVGLAPDGFVLIQSIEGQSD
YTCLGHWRLGTD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatcatcagggtgatctattcggcggtccgtcaccgccactgcatcgcctgttc
ttcgcactcctgccatccgcgtcggagcgcatgcaagtcgcgggcatagtcgacggactg
cgcgccagccacccgcatacgcgctgggtaaatccggagcgctaccatctgacccttcac
tacctgggcgagagcagcggtccccgggaagactggatagcgcgggcacgggaagctgct
gaagggttcagcggcgaggccttccacctgcaactggatcatctgctcccgctgggcaat
ccgcggcgaccggcgcttacgctggcggccttttcttcctcgacggaattgctccgtttc
tggcgtggcctgcaggaacgcctgatccgggccgggttcaaggatcatgtcggcaggagc
tttgtgccgcacctgaccctgggctacagcgagccagggcccgccacgccggcggtggcg
tcggttggcctcgcgcccgatggattcgtgttgatacagagcatcgaggggcaatcggat
tacacctgcctcggtcactggcgcctcggtacggattga
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