Pseudoxanthomonas japonensis: LAG73_11490
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Entry
LAG73_11490 CDS
T07964
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp00260
Glycine, serine and threonine metabolism
pjp00630
Glyoxylate and dicarboxylate metabolism
pjp00670
One carbon pool by folate
pjp00785
Lipoic acid metabolism
pjp01100
Metabolic pathways
pjp01110
Biosynthesis of secondary metabolites
pjp01200
Carbon metabolism
Module
pjp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAG73_11490 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAG73_11490 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAG73_11490 (gcvP)
00670 One carbon pool by folate
LAG73_11490 (gcvP)
Enzymes [BR:
pjp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LAG73_11490 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UBB24002
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Position
2504397..2507327
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AA seq
976 aa
AA seq
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MPLPMSQTPSSLRDLEHHDAFIARHIGPNDAEIAHMLRVVGHDSLEAMTDAIVPANIKSA
APLALPEAMTEEEALAKIRAVADRNQVFKSFIGQGYYGTHTPKVILRNILENPAWYTAYT
PYQAEISQGRMEALINFQTMITDLTGMEIASASLLDEATAAAEAMTLAKRSAKSKSNVFL
VAGDTHPQTIEVLQTRAEPLGLTVDIVRSTEAFHEKLAAGDYFGVLVQYPASSGWLEEWG
RDAEIIHGHQALFVMATDLLALTLLKTPGEMGADIVVGNTQRFGVPFGFGGPHAAFMACR
DAYKRSMPGRLIGVSVDADGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAV
YHGPEGLTRIARRVARLTAILAEGLRALGHATVHASAFDTLCIDAGDAAEAILARARQAR
INLRVRGNGTLCISLDETTTRADVEALWGVFATPGATLPGIDALDASAPSLIPEALRRTS
PFLTHPVFNTHHSEHELLRYMRALADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFG
NLHPLAPADQAQGYKELIDGLEAMLVECTGYDSVSLQPNSGAQGEYAGLLAIRAYHRSRG
EAKRDICLIPESAHGTNPASAQMCGMQVVVTKCDSNGNVDVEDIRRAAEKYSDRLAAIMM
TYPSTHGVFEEDVVEICNIIHQHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFC
IPHGGGGPGVGPCAVKSHLAPFLPRTLGGEGDVGMVSAASFGSASILPISWMYITLMGSA
GLRKATQVALLNANYVAKRLAPHYETLYTGRNGLVAHECILDLRPLKDATGISAEDVAKR
LIDFGFHAPTLSFPVAGTLMVEPTESESQHELDRFIDAMIQIREEIRAVEDGRLDREDNP
LKHAPHTATQVSASEWTHAYPRELAAFPLPSLKLQKYWPPVARVDNVHGDKNVFCSCIPV
EAFAGEPEAFSEPNVM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcccatgtcccagactccgtcctcgcttcgcgatctcgagcaccacgacgct
ttcatcgcccgccacatcggtcccaacgacgccgaaatcgcgcacatgctgcgcgtggtc
ggccacgactcgctggaggcgatgaccgatgccatcgtgccggccaacatcaagtccgcc
gccccgctggccctgcccgaagcgatgaccgaggaagaggcgctggccaagatccgcgcc
gtcgccgaccggaaccaggtgttcaagagtttcatcggccaggggtactacggcacccac
accccgaaggtgatcctgcgcaacatcctggagaacccggcctggtacaccgcctacacc
ccgtaccaggcggaaatctcgcagggccgcatggaagcgctgatcaacttccagaccatg
atcaccgacctgaccggcatggaaatcgccagcgcctcgctgctggacgaagccaccgcc
gccgccgaggcgatgaccctggccaagcgttcggccaagtcgaagtccaacgtgttcctg
gtcgccggcgacacccatccgcagacgattgaagtcctgcagacccgcgccgagccgctg
ggcctgaccgtggacatcgtccgttcgaccgaagcgttccatgaaaagctcgccgccggt
gactacttcggcgtgctggtgcagtaccccgcgtccagcggctggctggaggaatggggc
cgcgacgcggagatcatccacggccaccaggcgctgttcgtgatggccaccgacctgctg
gcgctgaccctgctcaagaccccgggcgagatgggcgccgacatcgtggtcggcaacacc
cagcgcttcggcgtgccgttcggcttcggcggcccgcacgcggccttcatggcctgccgc
gacgcctacaagcgctccatgccgggccgcctgattggcgtgtcggtggatgccgacggc
aatcccgcctaccgcctgaccctgcagacccgcgagcagcacatccgtcgcgagaaggcc
acctccaacatctgcaccgcgcaggtgctgctggcggtgatggcctcgatgtacgccgtc
taccacggtccggaaggcctgacccgcatcgcccgccgcgtcgcccgcctgaccgccatc
ctggccgaaggcctgcgcgcgctcggccacgccacggtgcacgccagcgcgttcgacacc
ctgtgcatcgacgccggcgacgccgccgaggcgatcctggcccgcgccaggcaggcccgc
atcaacctgcgcgtgcgtggcaacggcacgctgtgcatctcgctggacgaaaccaccacc
cgcgccgacgtcgaagcgctgtggggcgtgttcgccaccccgggcgccaccctgccgggc
atcgacgcgctggacgccagcgccccctcgctgatcccggaagccctgcgccgcaccagc
ccgttcctgacccacccggtgttcaacacccaccacagcgagcacgaactgctgcgctac
atgcgtgcgctggccgacaaggatctggcgatggatcgcaccatgatcccgctgggcagc
tgcaccatgaagctcaacgccaccgccgagatgatcccggtgacctggccggagttcggc
aacctgcacccgctggccccggccgatcaggcgcagggctacaaggaactgatcgacggc
ctggaagccatgctggtcgaatgcaccggctatgactcggtcagcctgcagcccaactcc
ggcgcgcagggcgaatacgccggcctgctggccatccgcgcctaccaccgctcgcgcggc
gaggccaagcgcgacatctgcctgattcccgaatccgcgcacggcaccaacccggccagc
gcgcagatgtgcggcatgcaggtggtggtcaccaagtgcgacagcaacggcaacgtcgat
gtcgaggacatccgccgcgccgccgagaagtacagcgatcgcctggccgcgatcatgatg
acctatccctctacccacggcgtgttcgaagaggacgtggtggagatctgcaacatcatc
caccagcacggcggccaggtgtacaccgatggcgccaacatgaacgcgctggtcggcgtg
gccaagccgggcaagtggggttcggacgtctcccacctcaacctgcacaagaccttctgc
attccgcacggcggcggcggcccgggcgtgggcccgtgcgcggtcaagtcgcacctggcg
ccgttcctgccgcgcacgctgggcggtgaaggcgacgtgggcatggtatcggcggccagc
ttcggcagcgccagcatcctgccgatcagctggatgtacatcaccctgatgggctcggcc
ggcctgcgcaaggccacccaggtggcgctgctcaacgccaactatgtcgccaagcgcctg
gccccgcactacgagaccctgtacaccggccgcaacggcctggtcgcgcacgagtgcatc
ctggatctgcgcccgctcaaggacgccaccggcatcagcgccgaggacgtggccaagcgc
ctgatcgacttcggcttccatgcccccaccctgagcttcccggtggcaggcacgctgatg
gtcgagccgaccgagagcgaatcgcagcacgaactggatcgcttcatcgacgcgatgatc
cagatccgcgaggaaatccgcgcggtcgaggacggccgcctggatcgcgaggacaatccg
ctcaagcatgctccgcacaccgccacccaggtcagcgccagcgaatggacccacgcttat
ccgcgtgaactggccgcgttcccgctgcccagcctgaagctgcagaagtactggccgccg
gtcgcacgcgtggacaacgtgcacggcgacaagaacgtgttctgcagctgcatcccggtg
gaagccttcgccggcgaaccggaagccttcagcgagccgaacgtgatgtaa
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