Pseudoxanthomonas japonensis: LAG73_12495
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Entry
LAG73_12495 CDS
T07964
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAG73_12495 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjp03021
]
LAG73_12495 (rpoA)
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_12495 (rpoA)
Enzymes [BR:
pjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAG73_12495 (rpoA)
Transcription machinery [BR:
pjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAG73_12495 (rpoA)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAG73_12495 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UBB24194
LinkDB
All DBs
Position
complement(2723794..2724792)
Genome browser
AA seq
332 aa
AA seq
DB search
MTGITQQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYSTIEGLQEDVLEVLLNLKDVAIRIHTGDSSTLTLSKQGPGVVTAADIKTDHN
VEILNPDLVICNLTKDTAINMRLKIERGFGYQPAAARRRPDEETRSIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASSGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtatcactcagcaagtgctgcgcccccgcggcccgcagatcgagcgtctgacc
gacaaccgcgccaaagtggtcatcgaaccgctggagcgtggttacggccatacgctcggc
aatgcgctgcgccgcgtgctgctctcctcgattcccggcttcgcgatcaccgaagtcgag
atcgacggcgtgctgcacgaatacagcaccatcgaaggcctgcaggaagacgtgctggaa
gtcctgctgaacctcaaggatgtggccatccgcatccacaccggtgattcctcgaccctg
accctgagcaagcagggcccgggcgtggtgaccgccgccgacatcaagaccgatcacaac
gtcgaaatcctcaatccggacctggtcatctgcaacctgaccaaggacaccgcgatcaac
atgcgcctgaagatcgagcgcggtttcggctaccagccggcggctgcccgccgtcgtccg
gatgaagagactcgcagcatcggccgcctggtgctggacgcttcgttctcgccggtccgc
cgcgtcgcctacgccgtggaagccgcgcgcgtggagcagcgtaccgacctggacaagctg
gtcctggacatcgagaccaacggcacgatcgacgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctatcggtgttcggcgacttcacccaccgcgaccgcggcgcg
gccaagccggccagcagcggcgtggatccggtgctgctgcgtccgatcgacgatctggag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgacctg
atccagaagaccgaagtggaactgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtcctggcgcagcgcggcctgtccctgggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgctcggctaa
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