Pseudoxanthomonas japonensis: LAG73_13370
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Entry
LAG73_13370 CDS
T07964
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAG73_13370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pjp03019
]
LAG73_13370 (recQ)
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_13370 (recQ)
Enzymes [BR:
pjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAG73_13370 (recQ)
Messenger RNA biogenesis [BR:
pjp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAG73_13370 (recQ)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAG73_13370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
PSD2
ResIII
LexA_DNA_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
UBB24349
LinkDB
All DBs
Position
2886778..2888571
Genome browser
AA seq
597 aa
AA seq
DB search
MSERPTDLLQRVFGYSRFRGHQQAIVEQLVSGQDALVLMPTGGGKSLCYQIPSLLREGVG
IVVSPLIALMQDQVEALRQLGVRAAFLNSTLDAATAADVERALLKGELDLLYVAPERLLT
PRFLSLLDRSRIALFAIDEAHCVSAWGHDFRREYLELTILHERWPDVPRIALTATADPPT
QREIAERLGLTEAQRFVSSFDRPNIRYTVTQKDNAKRQLRDFLQAHKGEAGIVYCLSRKR
VEQFADYLLEQGFNALPYHAGLDAEVRAHHQRRFLREEGIVMVATIAFGMGIDKPDVRFV
AHVDLPKSLEGYYQETGRAGRDGEAADAWLCYGLGDVVLLKQMIEQSEAGEERKRLERRK
LDQLLGYCESMQCRRQVLLASFGETYPQECGNCDNCLHPAATWDATEAARKALSCVYRSG
QRFGVNHIIDVLRGSESEKIRQCGHDQLTTYGIGRDLDAGTWRSVFRQLVSSGLLEVDAE
GYGSLRLTEASRTVLRGERRLLLRKEAPARERERSPRTGVVVSPSDQPLFGALRDLRAQL
AKQQNVPAYVIFHDSTLRNIAEHRPGTLDELAQVGGIGGTKLARYGEQVLEAIRAAG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtcctacggacctgctgcagcgggtcttcggctactcccgtttccgcggc
caccagcaggccatcgtcgaacagctcgtctccggccaggatgccctggtcctgatgccg
accggcggcggcaagtcgctgtgctaccagattccctcgctcctgcgcgaaggcgtgggc
atcgtggtgtccccgctgatcgcgctgatgcaggaccaggtggaagcactgcgccagctc
ggcgtgcgcgccgccttcctcaactcgacgctggacgccgccaccgcggcggacgtcgaa
cgcgccctgctgaagggcgaactggacctgctgtacgtggccccggaacggctgctgacg
ccgcgcttcctgtccctgctggatcgcagccggatcgcgctgttcgccatcgacgaggcg
cactgcgtctcggcctggggccacgatttccgccgcgagtacctggaactgacgatcctc
catgagcgctggcccgacgtgccgcggatcgccctgaccgccaccgccgacccgcccacc
cagcgcgagatcgccgagcgcctgggcctgaccgaggcgcagcgcttcgtcagttccttc
gaccgccccaatatccgctacacggtcacccagaaggacaacgccaagcgccagctgcgc
gatttcctccaggcccacaagggcgaggccggcatcgtctattgcctgtcgcgcaagcgg
gtggagcagttcgccgattacctgctggagcagggattcaatgccctgccctaccacgcc
ggcctggatgccgaagtgcgcgcgcaccaccagcgccgtttcctgcgcgaggaaggcatc
gtcatggtcgcgacgattgccttcggcatgggcatcgacaaaccggacgtgcgcttcgtg
gcgcatgtggacctgcccaagtcgctggagggctactaccaggaaaccggacgcgccggc
cgtgatggcgaggccgccgacgcctggctgtgctacgggctgggcgacgtggtgctgctg
aagcagatgatcgagcagtccgaggccggcgaggaacgcaagcggctggagcggcgcaag
ctggatcagctgctgggctactgcgaatccatgcaatgccgccggcaggtgctgctggcc
agcttcggcgaaacctatccccaggaatgcggcaactgcgacaactgcctgcatccggcc
gccacctgggatgccaccgaggccgcgcggaaggcgttgagttgcgtctatcgcagcggc
cagcgcttcggcgtgaaccacatcatcgacgtgctgcgcggcagcgagagcgagaagatc
cgccagtgcgggcatgaccagctcaccacctatggcatcggccgggatctggacgccggc
acctggcgcagcgtgttccggcaactggtgtcctccggcctgctggaggtcgatgccgaa
ggctatggcagcctgcgcctgaccgaggcgagccggaccgtgctgcgcggcgaacgccgc
ctgctgctgcgcaaggaggctccggcccgcgaacgcgagcgatccccgcgtaccggcgtc
gtggtctccccatccgaccagccgctgttcggcgccctgcgcgacctgcgcgcgcagttg
gcaaagcaacagaacgtcccggcctacgtcatcttccacgacagcaccctgcgcaacatc
gccgagcaccggcccggcaccctggacgaactggcccaggtcggcggcatcggcgggacc
aagctggcccgctacggcgaacaggtgctggaagcgatccgcgcggccggttga
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