Pseudoxanthomonas japonensis: LAG73_13870
Help
Entry
LAG73_13870 CDS
T07964
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp00260
Glycine, serine and threonine metabolism
pjp00460
Cyanoamino acid metabolism
pjp00630
Glyoxylate and dicarboxylate metabolism
pjp00670
One carbon pool by folate
pjp00680
Methane metabolism
pjp01100
Metabolic pathways
pjp01110
Biosynthesis of secondary metabolites
pjp01120
Microbial metabolism in diverse environments
pjp01200
Carbon metabolism
pjp01230
Biosynthesis of amino acids
pjp01240
Biosynthesis of cofactors
pjp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAG73_13870
09102 Energy metabolism
00680 Methane metabolism
LAG73_13870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAG73_13870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LAG73_13870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAG73_13870
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAG73_13870
Enzymes [BR:
pjp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LAG73_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UBB24442
LinkDB
All DBs
Position
complement(2998379..2999632)
Genome browser
AA seq
417 aa
AA seq
DB search
MFPSTTRIAGFDDELAQAIAAEARRQEDHVELIASENYASPRVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRVKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVEKLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKIGAYLFVDMAHVAGLVAAGVYPNPLPHAHVVTSTTHKTLRGPRGGIIL
AKGAGEDIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFTTYQQQVVKNAQAMAA
TIIQRGYKIVSGGTQNHLMLVDMIGKGITGKAAEEALGKAHITVNKNAVPNDPQKPFVTS
GLRIGTPAVTTRGYKEADCVALANWICDVLDAPGDDKVIAGVRENVTLQCRQFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccccagcaccacccgtattgccggattcgatgacgaactcgcccaggccatcgcc
gccgaggcccgtcgccaggaggaccacgtcgagctgatcgccagcgagaactacgccagc
ccgcgggtgatggaagcccagggcagcgtgctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggctgcgagtacgtcgacatcgccgaacagctggcgatcgac
cgggtcaagcagttgttcggcgccgactatgccaacgtgcagccgcattccggctcgcag
gccaaccaggcggtctatttcgcgctgctgcagccgggcgacaccatcctgggcatgtcg
ctggcgcatggcggccacctgacccacggcgccaaggtcaatgcctcgggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgactacgacgaagtcgagaag
ctggcgctggagcacaagccgaagatggtggtggccggtttctccgcctattcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaagatcggcgcctacctgttcgtggac
atggcgcacgtggccggcctggtcgccgccggcgtgtatccgaacccgctgccgcacgcc
cacgtggtcacctcgaccacccacaagaccctgcgcggtccgcgcggcggcatcatcctg
gccaagggtgccggcgaggacatcgagaagaagctgcagagcatcgtattcccgggtatc
cagggcggtccgctgatgcacgtcatcgccgccaaggcggtggccttcaaggaagcgctg
gagccggaattcaccacctaccagcagcaggtggtgaagaacgcgcaggcgatggccgcg
accatcatccagcgcggctacaagatcgtctccggcggcacccagaaccacctgatgctg
gtcgacatgatcggcaagggcatcaccggcaaggccgccgaggaagcgctgggcaaggcg
cacatcaccgtcaacaagaacgccgtgcccaacgacccgcagaagcccttcgtcacctcg
ggcctgcgcatcggcaccccggcggtgaccacccgcggctacaaggaagccgactgcgtg
gccctggccaactggatctgcgacgtgctggacgcgcccggcgacgacaaggtcatcgcc
ggcgtgcgcgagaacgtcaccctgcagtgccggcagttcccggtctacggctga
DBGET
integrated database retrieval system