Pseudoxanthomonas japonensis: LAG73_16710
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Entry
LAG73_16710 CDS
T07964
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03030
DNA replication
pjp03410
Base excision repair
pjp03420
Nucleotide excision repair
pjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAG73_16710 (polA)
03410 Base excision repair
LAG73_16710 (polA)
03420 Nucleotide excision repair
LAG73_16710 (polA)
03440 Homologous recombination
LAG73_16710 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjp03032
]
LAG73_16710 (polA)
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_16710 (polA)
Enzymes [BR:
pjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAG73_16710 (polA)
DNA replication proteins [BR:
pjp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAG73_16710 (polA)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAG73_16710 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAG73_16710 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UBB24951
LinkDB
All DBs
Position
complement(3666487..3669252)
Genome browser
AA seq
921 aa
AA seq
DB search
MKRLVLIDGSSYLFRAFHALPPLTNAAGEPTGALFGVVNMLRATLKEMPDYVAFVLDASG
PTFRDVLYPEYKANRPPMPEDLRAQVEPMRRIVEALGFPLLCVEGVEADDVIGTLALQGA
AQGIDVTISTSDKDFAQLVRPGVALVNTMSGSRMDSAEAVMEKFGVRPEQIVDFLALMGD
TVDNVPGVEKCGPKTAAKWLGEYGTLDAIVAGADGIKGKIGENLRAALPRLPLNRELVTI
KTDVALPGGPETLALRNRDVGELRELYSRYGFNQALKELDGGAAGAVAVAEKEPGRARGT
GFVSGPAPDAAPIDAAWSAPGEYETVLTEAQLEAWIARLAAADEFAFDTETDSLDAMQAN
LVGMSFAVEPGKAAYLPLGHVYPGAPAQLDQAATLARLAPLFADPGKRKLGQHGKYDLHV
LRRHGVEVGGYADDTMLESFVYNSGSNRHDMDSLAKRFLGYDTIKYEQVAGKGAKQILFS
QVALDDATRYAAEDADVTLRLHRVMAPKLAAEPGLERVYRDIEMPLVPVLARIEANGVRI
DGDELRRQSADLAKRMLAAQQKATELAGRSFNLDSPKQLQALLFDELKLPAVLKTPTGQP
STNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPVTGRVHTSYHQAGAATG
RLSSTDPNLQNIPIRTEDGRRIRKAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLVRAF
ESGADIHKATAAEVFGRQLEDVTSNERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDY
IALYFSRYPGVRDFMERTRQQAREHGYVETVFGRRLYLEYINKGTQGQRAGAERAAINAP
MQGTAADIIKRAMIAVDAWLAEHRERALMILQVHDELVFEADADFVPTLVAEAGARMSAA
AQLIVPLVVDSGVGDDWDQAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactagtcctgatcgacggatccagctacctgttccgcgcgttccatgcgctg
ccgcccctgaccaacgccgccggcgaaccgaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccacgctcaaggaaatgcccgactacgtggccttcgtgctggatgccagcgga
ccgaccttccgcgacgtcctgtatcccgagtacaaggccaaccgtccgccgatgcccgag
gatctgcgcgcgcaggtggaaccgatgcgccggatcgtcgaggcgctgggctttccgctg
ctgtgcgttgaaggcgtggaggccgacgacgtgatcggcacgctggcgctgcagggcgcg
gcgcagggcatcgacgtcaccatttccaccagcgacaaggatttcgcccagttggtgcga
ccgggcgtggcgctggtcaacaccatgagcggcagccggatggattcggccgaggcggtg
atggagaagttcggcgtgcggccggagcagatcgtcgacttccttgccctgatgggcgat
accgtggacaacgtgcccggcgtggagaagtgcggtcccaagaccgccgccaagtggctg
ggcgaatacggcacgctcgatgcgatcgtcgccggtgccgacggcatcaagggcaagatc
ggcgagaacctgcgcgcggcgctgccgcggctgccgctgaaccgtgaactggtcaccatc
aagaccgatgtggcgctgcccggcgggccggagacgctggcgctgcgcaatcgcgatgtc
ggcgaactgcgcgagctgtattcgcgctacggtttcaaccaggccttgaaggaactggac
ggcggcgccgccggcgcggtcgcggtcgcggagaaggaacccggccgcgcgcgcggcacc
ggtttcgtgtccgggccggcgccggatgccgcgccgatcgatgcggcgtggtccgcgccc
ggcgaatacgaaacggtcctgaccgaggcccagctcgaggcctggatcgcccggctggcg
gcggccgacgagttcgccttcgacaccgagaccgacagtctggacgcgatgcaggccaac
ctggtcggaatgagtttcgcggtggaacccggcaaggcggcctacctgccgctggggcac
gtctatccgggcgcgcccgcgcaactggaccaggccgccaccctggcgcggctggcgccg
ttgttcgccgatcccggcaagcgcaagctcggccagcacggcaagtacgatctgcacgtg
ctgcgccgccatggcgtggaggtcggcggctatgccgacgacaccatgctggagagcttc
gtatacaactccggcagcaaccgccacgacatggacagcctggccaagcgcttcctcggc
tacgacaccatcaagtacgaacaggtcgcgggcaagggcgccaagcagatcctgttctcg
caagtggcgctggacgacgccacccgctacgccgccgaggacgccgacgtgaccctgcgc
ctgcaccgggtgatggcgccgaaactcgccgccgagccgggcctggagcgcgtatatcgc
gacatcgagatgccgctggtgccggtgctggcgcgcatcgaggccaatggcgtgcgcatc
gacggcgacgaactgcgccggcagagcgcggacctggccaagcgcatgctggccgcccag
cagaaggccaccgaactggccgggcgcagcttcaacctggattcgcccaagcagctgcaa
gcgctgctgttcgacgaactcaagctgccggcggtgctgaagaccccgaccggccagccc
agcaccaacgaggaggcgctggaggcgatcgccgaccagcacgaactgccgcgcgtgatc
ctcgagtaccgcgggctggccaagctgcgcagcacctacaccgacaagctgccggaaatg
gtcaatccggtcaccggccgcgtgcacaccagctatcaccaggccggtgcggccaccggc
cggctgtcgtccaccgatcccaacctgcagaacatcccgatccgcaccgaggacggccgt
cgcatccgcaaggcgttcgtggcgccgccggggcgcaagctgatcgcctgcgattattcg
cagatcgagctgcggatcatggcgcacctgtccgaggatccgggcctggtgcgcgcgttc
gaatcgggcgccgacatccacaaggcgaccgcggcggaagtgttcgggcgacagctggag
gacgtgacctccaacgagcgccgcgcggccaaggcgatcaacttcggcctgatgtacggc
atgagcgcattcggcctggctcgccagctcggcatcggccgcggcgaggcgcaggattac
atcgcgctgtacttcagccgctatccgggcgtgcgcgacttcatggagcgcacccgccag
caggcgcgcgagcatggctacgtggagaccgtgttcggccgccggctgtacctggagtac
atcaacaagggtacccagggacagcgtgcaggcgccgagcgcgcggctatcaacgcgccg
atgcagggcacggccgcggacattatcaagcgcgcgatgatcgcggtggacgcgtggctg
gccgagcatcgcgaacgcgcgctgatgatcctgcaggtgcacgacgaactggtgttcgag
gccgatgccgacttcgtgcccacgctggtggccgaggccggcgcgcggatgtcggcggcg
gcgcaactcatcgttccgctggtggtcgacagcggggtcggcgacgactgggatcaggcc
cactga
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integrated database retrieval system
