Pseudoxanthomonas japonensis: LAG73_16725
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Entry
LAG73_16725 CDS
T07964
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03420
Nucleotide excision repair
pjp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAG73_16725 (uvrD)
03430 Mismatch repair
LAG73_16725 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_16725 (uvrD)
Enzymes [BR:
pjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAG73_16725 (uvrD)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAG73_16725 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LAG73_16725 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UBB24954
LinkDB
All DBs
Position
complement(3670437..3672614)
Genome browser
AA seq
725 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWLNEVEGVPTHGILAV
TFTNKAAGEMRARADLQLRNGSRGMWIGTFHGLAHRLLRLHWQEAKLPETFQVLDSDDQI
RLVKRVVQQLELDEARFPPRQIAWWINAQKDEGRRAEHLQPGDDIWADTLRRAYVLYQER
CDRAGLVDFAELLLRAHELLRDNPALLAHYRHRFRELLIDEFQDTNAIQYAFVRVLAGDT
GHVFVVGDDDQAIYGWRGAKVENVQRFLKDFPQARTIRLEQNYRSSANILNAANAVIAHN
PGRIGKQLWTDSGDGEPIDLYAAYNEIDEARFVVERIRQWVRDGGSLNDAAILYRSNAQS
RAFEETLLSEQVPYRVYGGMRFFERAEIKDTLAYLRLMANRDDDAAFERAVNTPARGIGD
RTMDEVRRLARAESLSLWQAARQQVGGTALAARARNALAGFLALVEALAAETGELPLQDR
IDHALMRSGLREHYAAESRGQLDSRTDNLDELVSVASRFVRVDDEETQGMTDLVAFLAYA
ALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSNKSLDESGRLEEERRL
AYVGITRARQKLVLSFAEARRLHGQDMYGIPSRFLREIPTALLNEVRPRVQVSRPAASYG
PRRDLGHAAVESPTLKLGQNVVHAKFGRGVVTDYEGSGAHARVQVHFDEEGSKWLVLAYA
NLQAV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcacctactcgatgatctgaaccccgcgcagcgcgaggccgtctccgcg
ccgccgggccattacctggtcctggccggcgccggctccggcaagacccgcgtgctcacc
caccgcatcgcctggctcaacgaagtcgagggcgtgccgacccacggcatcctggcggtg
accttcaccaacaaggcggccggcgagatgcgcgcgcgcgccgacctgcagctgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcccaccgcctgctgcgcctg
cactggcaggaagcgaagctgccggaaaccttccaggtgctggacagcgacgatcagatc
cgcctggtcaagcgggtggtgcagcagctggaactggacgaggcgcgcttcccgccgcgc
cagatcgcctggtggatcaacgcgcagaaggacgaaggccggcgcgccgaacacctgcag
ccgggcgacgacatctgggccgacacgctgcgccgggcctacgtgctgtaccaggaacgc
tgcgatcgcgccggcctggtcgatttcgccgaactgctgctgcgcgcgcacgaactgctg
cgcgacaacccggcgctgctggcgcattaccggcaccgcttccgcgagctgctgatcgac
gagttccaggacaccaacgccatccagtacgcgttcgtgcgggtgctggccggcgacacc
ggccacgtgttcgtggtcggcgacgacgaccaggccatctacggctggcgcggcgccaag
gtcgagaacgtgcagcgcttcctcaaggacttcccgcaggcgcgcaccatccggctcgag
cagaactaccgctccagcgccaacatcctcaatgccgccaacgcggtgatcgcgcacaac
cccggccgcatcggcaagcagctgtggaccgacagcggcgacggcgagccgatcgatctg
tacgcggcctacaacgaaatcgacgaagcccgcttcgtggtcgagcgcatccgccagtgg
gtacgcgatggcggcagcctcaacgacgcggccatcctctaccgcagcaacgcgcagtcg
cgggcattcgaagagaccctgctgtcggaacaggtgccgtaccgggtatacggcggcatg
cgcttcttcgagcgcgccgagatcaaggacaccctggcctacctgcggttgatggccaac
cgtgacgacgatgcggccttcgagcgggcggtcaacacgccggcgcgcggcatcggcgat
cgcaccatggacgaagtgcgccggctggcgcgcgcggaatcgctgtcgctgtggcaggct
gcgcggcagcaggtcggcggcaccgcgctggcggcgcgggcgcgcaacgccctggccggt
ttcctggcgctggtcgaagccttggcggcggaaaccggcgagttgccgttgcaggaccgc
atcgatcacgcgctgatgcgctcgggcctgcgcgaacactatgccgccgagagccgcggc
caactggattcgcgcaccgacaacctggacgaactggtgtcggtggcctcgcgtttcgtc
cgcgtcgacgacgaggagacccagggcatgaccgatctggtcgccttcctcgcctacgcc
gcactggaagccggcgagggccaggcccaggccggcgaggacggcgtgcagctgatgacc
ctgcattcggccaagggcctggagttcccgctggtgttcctggccggactggaagagggc
ctgttccccagcaacaagtcgctggacgagagcggccggctggaggaggagcgccgcctg
gcttacgtcggcatcacccgcgcgcggcagaagctggtgctgagcttcgccgaggcgcgc
cgcctgcacggccaggacatgtacggcattccctcgcggttcctgcgcgaaattcccacc
gcgctgctgaacgaggtgcgtccgcgcgtgcaggtgtcccgcccggcggccagctacggc
ccgcgccgcgatctgggccacgccgcggtggaatcgcccacgctcaagctcggccagaac
gtcgtgcacgcgaaattcgggcgcggtgtggtaactgactacgagggcagcggcgcgcat
gcgcgcgtgcaggtccacttcgacgaggaaggcagcaaatggctggtgctcgcctatgcc
aatttgcaggcggtgtga
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