Pseudoxanthomonas japonensis: LAG73_16880
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Entry
LAG73_16880 CDS
T07964
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAG73_16880 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_16880 (xth)
Enzymes [BR:
pjp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LAG73_16880 (xth)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LAG73_16880 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UBB24981
LinkDB
All DBs
Position
3702580..3703350
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AA seq
256 aa
AA seq
DB search
MKIASWNVNSLNVRQPHLEQWLGAFSPDVVGIQETKLEDHRFPDTVLAGLGYRSIFAGQK
TYNGVAILSRVPATEVQIGIPGFEDEQKRVIAATVGDLRIVNLYVVNGQDVGTDKYAYKL
RWLDAVHGWLAEELQRHPKMVVLGDFNIAPDDRDVYDPKVWGDAHILTSVAERDALRRLY
ALGLHDAFRMHNDEAGVYSWWDYRMGGLRRNLGLRIDLTLVSDALRAQAAAAGIDREPRT
WERPSDHAPAWVQLAG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccagctggaacgtcaattcgctcaatgtccgccagccgcatctggagcaa
tggctgggtgcgttctcgccggacgtggtgggcatccaggaaaccaagctggaggatcac
cgcttccccgacaccgtgctggccgggctgggctaccgcagcatcttcgccgggcagaag
acctacaacggcgtggcgatcctgtcgcgcgtgccggccacggaagtgcagatcggcatc
cccggtttcgaggacgaacagaagcgcgtgatcgccgcgaccgtgggcgatctgcgcatc
gtcaacctgtacgtggtcaacggccaggacgtgggcaccgacaagtacgcctacaagctg
cgctggctcgacgcggtgcacggctggcttgccgaggagctgcagcggcacccgaagatg
gtcgtgctgggcgatttcaacatcgccccggacgatcgcgacgtctacgaccccaaggtc
tggggcgatgcccacatcctgacctcggtcgccgagcgcgacgcgctccgccgcctgtac
gcgctcggcctgcacgacgccttccgcatgcacaacgacgaagccggcgtgtacagctgg
tgggactaccggatgggcgggctgcgccgcaacctgggcctgcgcatcgatctcaccctg
gtctcggacgcgttgcgcgcgcaggccgccgccgccggcatcgatcgcgagccgcgcacc
tgggaacgccccagcgaccacgcgccggcctgggtgcaactggccggctga
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