Pseudoxanthomonas japonensis: LAG73_17735
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Entry
LAG73_17735 CDS
T07964
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAG73_17735 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_17735 (recB)
Enzymes [BR:
pjp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LAG73_17735 (recB)
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAG73_17735 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBB25143
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All DBs
Position
3883994..3887695
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AA seq
1233 aa
AA seq
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MSATMPAANAYLTRALDGVQLIEASAGTGKTYTLATLFTRLIVEQRLRMGQVLAVTYTEA
ATQELRKRIRERLSLAAGLVGTLAGNDDSHEAALTRGILQRQLERGEETPDQLSRRLRIA
AEETDLAAIFTIHGFCARVLREHALETGQGFDAFELLGNARDLYAEVAADLWRMHAADPA
DADALMGLWNGPDALAGDLPALCGPLPLYPQVPSDTDPRAQAETQAVRAARAANLIEAIA
NHQADARAAIAAAFDNKVFDGRRARRPSFDKAFEELQAGTRLGDWPRTDKTHVQKLLPDA
LAGFCKEGQGAGAPASPLFDALRDWCEADTAWQRVQLLQRTALLHHLRAEARQRLDALKR
LRRVRTYDDLIEGVAEALEGPHRQALVARLRAQYRVALVDEFQDTDERQWRIFARVFGDS
DEVRAIGDVPALFLIGDPKQAIYGFRGGDVATYLLARGEADEAPRLDHNFRSRPGVLRAV
QALYDGAREAGQDAFLHPGIQFEPVHAGGKRGDADYLRDGEPAPALTLRLLRQADGQPLG
ADGSRDAATAACVAEIHRVLNDAREGRALLDGRPVRPGDIAVLVRNHRDATRMQQALARA
GVPAVAAGKQSLFETTEAGELRTLLLALLQPADSGRLRAALSTVLLGEDAHAIAALETEG
DAQRHYQARLLHWRERWQRSGPFALVSDLCAEQAERLLGLIDGERRMTNYLQLGEQLQEA
AAHTLGLHGLLDWLQARIANADPDDETQLLRLESDALRVQIVTLHKSKGLEYPLVYLPFT
GIGTRRPDSGRYRVLHEGGRRVLRWRIDKEDPAWKAAGDAASGDGQAEDARLLYVGLTRA
EHALWIAAGDITDFARSRLAPLLAGAESLRGHADVRIVEGPAEPPPPRLPAEHDAGVAPA
RVARRRIAADWWVYSFTQLAHAESGADPLAAATQADPGGEDETRVADVDESGAETAASVF
TADPRFAGSHFGVVMHAALEDADFAAWRDWRPGDDAPAGQDRIIADALRAGGYAEADVAD
GLAVLVPLIGHTLGTVMPEGGRLADLPPDMRRAEIEFHFAMTSTPVTALLALLHEHGVLR
QRHAFGLRQRLEGLMTGLIDLTYCQDGRWYVLDYKSNQLPGYDAASMQQAMAHSEYDLQA
LIYTLALHRWLRFRLGEAYDYARDFGGVRYLFCRGMDLTRDPSPGVHAQRFAPELVHALD
ALFAGSVPSSRDLPPPPQAGEGRGGGNRQGNRA
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccatgcctgcggccaatgcctacctgacccgcgcgctcgatggcgtgcag
ctgatcgaagccagcgccggcaccggcaagacctacacgctcgccaccctgttcacccgc
ctgatcgtcgaacagcgcctgcgcatgggccaggtgctggcggtgacctacaccgaggcc
gccacccaggaactgcgcaagcgcatccgcgaacgcctgtcgctggccgccggcctcgtc
ggcacgctcgccggcaacgacgacagccacgaggccgcgctgacccgcggcattctccag
cgccagctcgaacgcggcgaggaaactcccgaccagttgtcccgccgcctgcgcatcgcg
gcggaggaaaccgatctggccgcgatcttcaccatccacggtttctgcgcacgcgtgctg
cgcgagcacgcgctggaaaccgggcagggcttcgacgcgttcgaactgcttggcaacgcg
cgcgacctgtatgccgaggtggccgcggatctgtggcgcatgcacgcggccgatccggcg
gacgccgacgcgctgatgggcctgtggaacggaccggacgcgctggcgggggacttgccg
gcgctatgcggaccgttgccgctgtatccgcaggtgccgtccgataccgatccgcgggcg
caggctgaaacacaggccgtgcgcgcggcccgtgccgcgaatctgatcgaggccatcgcc
aaccatcaggccgatgcgcgcgcggcgatcgccgcggcgttcgacaacaaggtgttcgat
ggccggcgcgcgcggcggccgagcttcgacaaggcgttcgaggaactccaggcgggcacg
cggctgggcgactggccacgcactgacaagacccacgtgcagaagctgttgccggacgcg
ttggccggcttctgcaaggaagggcagggtgccggcgcgccggcatcgccgctgttcgac
gccttgcgcgattggtgcgaagccgatacggcctggcagcgggtgcaactgctgcaacgc
acggccctgctgcaccacctgcgcgccgaggcgcgccagcgcctggatgcgctcaagcgg
ctgcgccgcgtgcgcacctacgacgatctgatcgaaggcgtcgccgaagcgctggaaggt
ccgcaccggcaggcgctggtggcgcggttgcgcgcgcagtaccgggtcgcgctggtggat
gaattccaggacaccgacgagcgccaatggcggatcttcgcgcgggtgttcggcgactcg
gacgaggtgcgcgcgatcggcgacgtaccggcgctattcctgattggcgatcccaagcag
gccatctacggtttccgcggcggcgacgtggccacctacctgctcgcgcgtggcgaagcc
gacgaggcgccgcggctggatcacaacttccgctcgcgccccggcgtgctgcgcgccgtc
caggcgctgtacgacggcgcgcgggaggcggggcaggacgcctttctccatcccggcatc
cagttcgaacccgtgcatgccggcggcaagcgcggtgacgccgactatctgcgcgatggc
gaaccggcgcccgcgttgaccctgcgcctgctgcgtcaggcggatggccagccgctcggc
gccgacggctcgcgcgacgccgccaccgccgcctgcgtggccgagatccatcgcgtattg
aacgacgcgcgcgaaggccgcgcgctgctcgacggccgtccggtgcgtcccggcgacatc
gccgtgctggtgcgcaaccaccgcgacgccacccgcatgcagcaggcgctcgcccgcgcc
ggcgtgcccgccgtcgccgccggcaagcagagcctgttcgagaccaccgaagccggtgaa
ctgcgcaccctgctgctggcgctgctgcaaccggccgacagcggtcgcctgcgtgccgcg
ttgtccaccgtgctgctgggtgaggacgcccacgcgatcgccgcgctggaaaccgaaggc
gacgcgcagcggcactaccaggcccgcctgctgcactggcgcgagcgctggcagcgcagc
ggtccgttcgcgctggtgtccgatctgtgcgccgaacaggccgaacgcctgcttggcctg
atcgacggcgagcgccgcatgaccaactacctgcagttgggcgaacagttgcaggaagcc
gccgcgcacacgctcggcctgcacggcctgcttgactggctacaggcgcgcattgccaac
gccgatcccgacgacgagacccagctgctgcgactggaatcggacgcgctccgcgtgcag
atcgtcaccctgcacaagagcaagggcctggagtacccgctggtctatctgcccttcacc
ggcatcggcacgcgccgtccggacagtggccgctaccgcgtgctgcacgaaggcggccgc
cgcgtgttgcgctggcgcatcgacaaggaggatccggcgtggaaggccgccggcgacgcg
gcttccggcgatggccaggccgaggacgcacgcctgctctatgtcggcctcacccgcgcc
gagcatgcgctgtggatcgcggcgggcgacatcaccgacttcgccaggagtcgcctcgcg
ccgctgctggccggcgccgaatcgctgcgcgggcacgccgatgtccgcatcgtcgaaggc
ccggccgaaccgccgccgccgcgcctgcccgccgaacacgacgccggcgtggcgcccgcg
cgcgtcgcccgccgccgtatcgccgccgactggtgggtctacagcttcacccagctcgcc
cacgccgaatccggcgccgacccgcttgccgccgccacccaggctgaccccggcggcgag
gacgaaacccgcgtggccgacgtcgacgaatccggcgccgaaaccgccgcttccgtcttc
accgccgatccgcgtttcgccggcagccacttcggcgtggtcatgcacgccgcgctggaa
gacgccgacttcgctgcctggcgcgactggcgacccggcgacgatgcgcccgccggacag
gaccgaatcatcgccgacgccctgcgcgcgggtggctatgccgaagccgatgtcgccgac
ggcctcgccgtgctggtgccgctgatcggccataccctgggcacggtgatgcccgaaggc
ggtcgcctggccgacctgccgccggacatgcgccgcgcggaaatcgaattccatttcgcc
atgacctccacgccggtcaccgcgctgctcgcgttgctgcacgagcatggcgtgctgcgc
cagcggcacgcgttcggcctgcgccagcggctggaaggcctgatgaccggcctgatcgat
ctgacctattgccaggacggacgctggtacgtgctggactacaagtccaaccagttgccc
ggctacgacgccgcgtcgatgcagcaggcgatggcgcacagcgaatacgacctgcaggcg
ctgatctacacgctggccctgcaccggtggctgcgtttccggctgggcgaggcctatgac
tatgcacgcgacttcggcggcgtgcgctacctgttctgccgcggcatggatctcacccgg
gatccctcgcccggcgtccacgcccaacgcttcgcccccgaactcgtccatgcactcgat
gccttgttcgccggctccgttccatcgtcccgcgatctgccccctcccccgcaagcgggg
gagggccggggtgggggcaaccgccaaggtaatcgcgcatga
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