Pseudoxanthomonas japonensis: LAG73_18060
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Entry
LAG73_18060 CDS
T07964
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pjp
Pseudoxanthomonas japonensis
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjp03032
]
LAG73_18060
03400 DNA repair and recombination proteins [BR:
pjp03400
]
LAG73_18060
Enzymes [BR:
pjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAG73_18060
DNA replication proteins [BR:
pjp03032
]
Prokaryotic type
DNA Topoisomerases
LAG73_18060
DNA repair and recombination proteins [BR:
pjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAG73_18060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
NifZ
Motif
Other DBs
NCBI-ProteinID:
UBB25208
LinkDB
All DBs
Position
3944694..3945800
Genome browser
AA seq
368 aa
AA seq
DB search
MPGSPEVLNALADAAAQAREAGLIHVSDAEPGIRRRRAGKGFVYLDPAGARVRDAATLER
IRALAVPPAYTEVWICPHARGHLQATGRDARRRKQYRYHPQWSEVRGNGKFTRIVAFGRA
LPRLRRRVRTDLARPGHPRGKVLAIVVALMGATLVRIGNAGYVRDNGSFGLTTLRNRHVE
FVRGGRVRLRFAGKGGQVHDIAVDDRRLVRLVRGCRQLPGQLLFQYRDDDGQLHPVDSGA
VNDYLREAMGEAFTAKDFRTWGGTLAAFQQLAAIPLPARGGERALARVRQTVTEAVAGML
GNTVAVCRKAYIDPCVFEGWRDGRVARCAGDARGPRQWEGAALRFLSRAHRDAARAASGG
KRKAAKRK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatctcccgaagtcttgaatgctctcgccgacgcggccgcgcaggcgcgcgaa
gccggcctgattcatgtcagcgatgctgaaccggggatccgccgccggcgtgccggcaag
ggtttcgtttatctggatccggcgggcgcgcgcgtccgcgatgcggcgacgctggaacgc
atccgcgcgctggccgtcccgccggcctataccgaggtgtggatctgcccgcatgcgcgc
ggccatctgcaggccaccggacgcgatgcgcggcggcgcaagcagtaccgctaccacccg
caatggagcgaagtgcgtggcaatggcaagttcacccggatcgttgccttcggccgtgct
ctgccgcgcctgcgtcgccgggttcgtaccgatctggcgcggccaggccatccgcgcggg
aaggtgctggcgatcgtggtggcgttgatgggcgcgacgctggtgcggatcggcaacgcc
ggctacgtgcgcgacaacggttccttcggcttgaccaccctgcgcaatcgccatgtcgag
ttcgtgcgtgggggccgggtgcggcttcgcttcgccggcaagggcggacaggtgcacgac
atcgcggtcgatgatcgacggctggtccgcctggtgcgtggctgccggcaactgcccggg
caattgctgttccagtaccgcgacgacgatggccagctgcatccggtggattcgggcgcg
gtcaacgactacctgcgcgaggcgatgggcgaggcgttcaccgccaaggatttccgcacc
tggggcgggaccctggccgcgttccagcagctggcggcgattccgttgccggcgcgcggc
ggtgagcgcgcgctggcgcgggtgcggcagacggtcaccgaggcggtcgccggaatgctg
ggcaacacggtggcggtgtgccgcaaggcctatatcgacccgtgcgtgttcgagggctgg
cgcgatgggcgggtggcgcgctgcgcgggagacgcgcgcgggccccggcaatgggaaggc
gccgcgctgcgttttctcagccgggcccaccgcgacgccgcgcgtgcggcgtcgggcggg
aagcggaaagcggcgaagcggaaatga
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