Pseudoxanthomonas japonensis: LAG73_19630
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Entry
LAG73_19630 CDS
T07964
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pjp
Pseudoxanthomonas japonensis
Pathway
pjp00010
Glycolysis / Gluconeogenesis
pjp00020
Citrate cycle (TCA cycle)
pjp00260
Glycine, serine and threonine metabolism
pjp00280
Valine, leucine and isoleucine degradation
pjp00310
Lysine degradation
pjp00380
Tryptophan metabolism
pjp00620
Pyruvate metabolism
pjp00630
Glyoxylate and dicarboxylate metabolism
pjp00640
Propanoate metabolism
pjp00670
One carbon pool by folate
pjp00785
Lipoic acid metabolism
pjp01100
Metabolic pathways
pjp01110
Biosynthesis of secondary metabolites
pjp01120
Microbial metabolism in diverse environments
pjp01200
Carbon metabolism
pjp01210
2-Oxocarboxylic acid metabolism
pjp01240
Biosynthesis of cofactors
Module
pjp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pjp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pjp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pjp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pjp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LAG73_19630 (lpdA)
00020 Citrate cycle (TCA cycle)
LAG73_19630 (lpdA)
00620 Pyruvate metabolism
LAG73_19630 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LAG73_19630 (lpdA)
00640 Propanoate metabolism
LAG73_19630 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAG73_19630 (lpdA)
00280 Valine, leucine and isoleucine degradation
LAG73_19630 (lpdA)
00310 Lysine degradation
LAG73_19630 (lpdA)
00380 Tryptophan metabolism
LAG73_19630 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAG73_19630 (lpdA)
00670 One carbon pool by folate
LAG73_19630 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pjp04147
]
LAG73_19630 (lpdA)
Enzymes [BR:
pjp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LAG73_19630 (lpdA)
Exosome [BR:
pjp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LAG73_19630 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Biotin_lipoyl
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GCV_H
GIDA
Biotin_lipoyl_2
HI0933_like
FAD_binding_2
NAD_binding_8
Thi4
AlaDh_PNT_C
3HCDH_N
DAO
FAD_binding_3
DUF478
Motif
Other DBs
NCBI-ProteinID:
UBB25500
LinkDB
All DBs
Position
4316351..4318501
Genome browser
AA seq
716 aa
AA seq
DB search
MANTTVEVKVPDIGGYDDVPVIEILVAVGDTVKKDQGLVTLESDKATMEVPSSAAGVIKE
LKVKLGDALSEGSVVAVLEVEGAAAAPSAPAAAPAAPAKAAAPAVPAASAPAPAAPSAPA
ASAGGTLEAKVPDIGGYNDVPVIEILVAVGDTVKKDQGLVTLESDKATMEVPSPAAGVIK
ELKVKLGDTLSEGSVVAVLESGAAAPAAAAPASKPPVTPSHRAPAEPAAPKPALGTGQPA
DIECRMVVIGSGPGGYTAAFRAADVGLDTVLVERYDSLGGVCLNVGCIPSKALLHAAALI
DETAHSADIGIEFAKPKIDLDKLRDFKQNRVVGQFTKGLAGMAKQRKVRTVQGVAKFVSP
HELEITGSDGKTQLLRFENCIIAAGSQAVKLPNFPWDDPRVMDSTDALALQEVPKKLLVV
GGGIIGLEMATVYRALGSEVTVVEFMDQLMPGADKDLVKPLADRLKKQGVAVHLKTKAAK
VEASKKGITVSFESATEGQKPELESGTWDRVLVAVGRSPNGGKLDADKAGVTITDRGFIP
VDPQMRTNVPHIFAIGDLVGQPMLAHKATHEGKLAAEVAAGEKKEWVARVIPSVAYTDPE
IAWVGVTETEAKAKGLKVGIGKFPWVASARAVGIGRGEGSTKLIFDEETHRIIGGGIVGV
HAGDLISEIALAIEMGAEAGDIGSTIHPHPTLSETVAMAAEVYEGTITDLYIPKKK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacgactgttgaagtaaaagtccccgacatcggcggttacgacgatgtgccg
gtcatcgagatcctggtcgcggtgggcgacacggtgaaaaaggatcagggcctggtcacc
ctggaatcggacaaggccacgatggaagtgccgtcctcggccgccggcgtgatcaaggaa
ttgaaagtcaagctgggcgatgccctgtccgaaggcagcgtggtggcggtgctggaagtc
gaaggtgccgccgcggcgccgtccgcgcccgccgccgctccggctgcgccggccaaggcg
gccgcacccgctgttccggccgcgtccgcgccggcgcctgccgcgccatccgcgcctgcg
gcatcggcgggcggcacgctggaagccaaggtgccggacatcggcggctacaacgacgtg
ccggtcatcgaaatcctggtcgccgtgggcgacacggtgaagaaggatcagggcctggtc
accctggaatcggacaaggcgacgatggaagtgccgtcgccggccgccggcgtgatcaag
gaactgaaggtcaagctgggcgacaccctgtccgaaggcagcgtggtggccgtgctggaa
agcggcgcggccgcgcctgcggccgccgcgccggccagcaagccgccggtcacgccctcg
caccgcgcgccggccgaacccgccgcgccgaagccggcgctgggcaccggccagcccgcg
gacatcgaatgccggatggtggtgatcggttccggtcccggtggttacaccgccgcgttc
cgcgccgccgacgtcggtctcgacaccgtgctggtggagcgctacgactcgctcggcggc
gtctgcctcaacgtcggttgcatcccgtccaaggcgctgctgcatgccgccgcactgatc
gacgagaccgcgcattcggccgatatcggcatcgagttcgccaagccgaagatcgatctc
gacaagctgcgcgacttcaagcagaaccgcgtggtcggccagttcaccaagggcctggcc
ggcatggccaagcaacgcaaggtgcgcaccgtgcagggcgtggcgaagttcgtctcgccg
cacgaactggaaatcaccggcagcgatggcaagacccagctgctgcgtttcgagaactgc
atcatcgccgccggttcgcaggcggtgaagctgcccaacttcccgtgggacgatccgcgg
gtgatggattccaccgacgcgctggcgctgcaggaagtgccgaagaagctgctggtggtc
ggcggcggcatcatcggcctggaaatggcgacggtgtaccgcgcgctgggcagcgaagtg
accgtggtcgagttcatggaccagctgatgccgggcgccgacaaggatctggtcaagccg
ctggccgatcgcctgaagaagcagggcgtggccgtgcacctgaagaccaaggcggccaag
gtcgaagcctccaagaagggcatcaccgtgtcgttcgagagcgccaccgaaggccagaag
ccggaactggaatccggcacctgggatcgcgtgctggtcgcggtgggccgttcgcccaac
ggcggcaagctggatgccgacaaggccggcgtgaccataaccgatcgcggcttcatcccg
gtggacccgcagatgcgcaccaacgtgccgcacatcttcgccatcggcgatctggtcggc
cagcccatgctcgcgcacaaggccacccatgaaggcaagctggcggcggaagtggccgcg
ggcgagaagaaggaatgggtggcgcgggtgattccgtcggtggcctacaccgatccggaa
atcgcctgggtcggcgtcaccgagaccgaagccaaggccaagggcctgaaggtcggcatc
ggcaagttcccgtgggtggcgtcggcgcgcgcggtcggcatcggtcgcggcgaaggttcc
accaagctgatcttcgacgaggaaacccaccgcatcatcggcggcggcatcgtcggcgtg
catgccggcgatctgatcagcgaaatcgcgctggcgatcgagatgggcgccgaagccggc
gacatcggcagcaccatccatccgcacccgaccctcagcgagacggtggcgatggcggcc
gaagtctacgaaggcaccatcaccgacctgtacattccgaagaagaagtaa
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