Pseudomonas juntendi: L1P09_00400
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Entry
L1P09_00400 CDS
T08267
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pju
Pseudomonas juntendi
Pathway
pju03030
DNA replication
pju03410
Base excision repair
pju03420
Nucleotide excision repair
pju03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1P09_00400 (polA)
03410 Base excision repair
L1P09_00400 (polA)
03420 Nucleotide excision repair
L1P09_00400 (polA)
03440 Homologous recombination
L1P09_00400 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pju03032
]
L1P09_00400 (polA)
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_00400 (polA)
Enzymes [BR:
pju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L1P09_00400 (polA)
DNA replication proteins [BR:
pju03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L1P09_00400 (polA)
DNA repair and recombination proteins [BR:
pju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L1P09_00400 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1P09_00400 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
UJM12705
LinkDB
All DBs
Position
78426..81173
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR
SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVPLDVEVEALVCGEPDRDALLALYTEMEFKSWVADVQREAARVGDDV
APVAEPVAKVEPKYETILDQTRFEAWLEKLRQAPLFAFDTETTGLDAQKAQLVGLSFAVA
PHEAAYVPLAHDYEGAPAQLDRDAVLLALKPLLEDPTKAKVGQNAKYDINILANGSPAIA
MRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQIDLDKA
GPYAAEDADITLRLHHALQARLAQTPSLQPVLMDIEMPLVPVLAKIERQGALVDAALLHV
QSGELGEKMAELERRAYELAGEEFNLGSPKQLGAILYDKLGMPVLSKTAKGQPSTAEAVL
DELAELGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDV
HRATAAEVFGVALENVTVDQRRKAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRTQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIIKRAMVNVDNWLSESGLDARVILQVHDELVLEVREDLVEQVKDEIRQHMSKAAQLDVP
LLVEAGIGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcctcctacctgtaccgcgcctttcac
gcgctgccgccgctgaccacgtccaagggcatgccgaccggtgcggtgaagggtgtgctg
aacatgctcaagagcctgcgcaagcaataccccgacagcctctttgccgtggtgttcgac
gccaagggtggcacgttccgtgacgccatgttcgccgaatacaaggccaaccggccgagc
atgcccgacgacctgcgggtgcagatcgagccgctgcacgccagcgtcaaggcccttggc
tacccgctgctgtgcgtggaaggggtcgaggccgacgacgtgatcggcaccctggcgcgc
agcagcgccgccttgggccgcccggtcatcatttcgaccggtgacaaggacatggcgcag
ctggtggatggccacattaccttggtcaacaccatgaccggtagcgtgctggacgtggcg
ggcgtgcatgagaagtttggcgtcggcccggagcacatcatcgacttcctggccctgatg
ggcgacaaggtcgacaacatccccggtgtgcccggtgtgggcgagaaaaccgccgtgggc
ctgttgaccggtattggtggcggcctcagcgacctgtacgccaacctcgacaaggtgccg
gcactggccattcgcggtgccaagaccctgccggccaagctggaagagcaccgcgacgcg
gcgttcctgtcgtatgagctggctaccatcaaggtcgacgtgccgctggacgtcgaggtc
gaggcgctggtatgcggcgagcctgaccgcgatgcgctgctggcgctgtacaccgagatg
gagttcaagagctgggttgccgacgtgcagcgggaggctgccagggtgggtgatgacgtt
gcgccggtcgcggagccggtggccaaggtcgagccgaagtacgaaaccatcctcgaccaa
acacgcttcgaggcctggctggagaagctgcgccaggcgccgctgttcgcgttcgacacc
gaaaccaccggcctggacgcccagaaggcccaattggtcggcctgtcgttcgcggtggcg
ccccatgaagcggcctacgttccgctggcccacgactatgagggcgcgccggcccagctg
gaccgcgacgccgtgctgctggccttgaagcccctgctggaagacccgaccaaggccaag
gtcgggcagaatgccaaatacgatatcaacatcctcgccaacggttcgcccgccatcgcc
atgcgcggtgttgcctatgacaccatgctcgagtcctacgtgctgaactccacggccacc
cggcatgacatggacagcctggcgcaaaagtacctcgaccacactaccatcgccttcgag
gacatcgccggcaagggcgccaagcagcttacgttcaaccagatcgacctggacaaggcg
ggcccctacgctgccgaagacgctgacatcaccctgcgcctgcaccatgcgttgcaggcc
cgcctggcccagaccccaagcctgcagccggtgctgatggacatcgagatgccgctggtg
ccggtactggccaagatcgaacgccagggcgcactggtcgatgcagccctgctgcacgtc
cagagcggtgagctgggtgagaaaatggccgagctggaacggcgcgcctacgagctggcg
ggcgaggagttcaacctgggctcgcccaagcaactgggggcgatcctgtacgacaagctg
ggcatgccggtgctgagcaagaccgccaaaggccagccgtctaccgccgaagcggtgctc
gacgagctggcggagctgggttacccactgcctgaagtactgatgcagtaccgcagcctg
agcaagctcaagagcacttacaccgacaagctgccggggcagatcaacccgcgtaccggg
cgtattcacacctcttaccagcaagcggtggcggcgactggccggctgtcgtccagcgac
ccgaacctgcagaacatcccgatccgtaccgccgagggccgccgaatccgccaggcgttc
atcgccagcccaggctacaagctgctggcggcggactattcgcagatcgagttgcgcatc
atggcccacctggccaaggacgaaggcttgctgcacgccttccgcaatgacctggacgtg
caccgtgccacggcggcggaggtctttggtgtagccctggaaaacgtcaccgtcgatcag
cgtcgcaaagccaaggccatcaacttcggcctgatctacggcatgagcgcatttggtctg
gccaagcagatcggcgtcgaccgcaagcagtcgcaggactatatcgaccgctacttcgcc
cgctaccccggggtgctggcctacatggagcgcacccgtacccaggctgccgagcaaggt
ttcgtcgaaaccctgtttggccgccgcctctacctgccagacatcaacgccaagaacccg
gccctgcgcaaaggggcagagcgtaccgccatcaatgcgcccatgcagggtaccgccgcc
gacatcatcaagcgcgccatggtcaacgtggataactggctgagcgagagcggcctggac
gcgcgggtgatcctgcaggttcacgacgaactggtgcttgaggtgcgcgaggacctggtt
gaacaggtcaaagatgaaattcgccagcacatgagcaaggcggcgcagctggatgtgccg
ctgctggtagaagcaggaattggtgcgaactgggacgaagctcactga
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