KEGG   Pseudomonas juntendi: L1P09_01645
Entry
L1P09_01645       CDS       T08267                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pju  Pseudomonas juntendi
Pathway
pju03030  DNA replication
pju03430  Mismatch repair
pju03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L1P09_01645
   03430 Mismatch repair
    L1P09_01645
   03440 Homologous recombination
    L1P09_01645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pju03032]
    L1P09_01645
   03400 DNA repair and recombination proteins [BR:pju03400]
    L1P09_01645
Enzymes [BR:pju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L1P09_01645
DNA replication proteins [BR:pju03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L1P09_01645
DNA repair and recombination proteins [BR:pju03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L1P09_01645
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: UJM12926
LinkDB
Position
complement(379010..379720)
AA seq 236 aa
MSLFAWLRPGTPELDPATRQRLARQPKPAPLGVCTLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFAQQFERTLQRPLLKTNASVLIHGLGPSALAAGCEPAEALLDLLDFIG
DSPVLAFHAPFDQRMLARALKESLGYRLQSPFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADAQVTAELVLILFSQARRQQLDSPLQLEQRLRGWRRRKVQSHGM
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcctgttcgcctggctgcgccccggcacacccgagctggaccctgccacgcgccag
cgcctggcccggcaacctaaacccgcgcccctgggtgtgtgcacgttgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcgggctcaaccccaaccgtgaccaggtactgtcg
atcggcgcagtggccattgaggacggggccatcgactttgcccagcaatttgaacgcacc
ctgcagcggccactgttgaaaaccaacgccagcgtgctgattcacgggctcgggccaagc
gccctggcggccggttgcgagcccgccgaagccttgctggacctgctcgacttcattggc
gacagcccggtgctggcattccatgctccgttcgaccagcgcatgctggcgcgggcactg
aaagaaagcctgggttaccgcttgcagtcgccgtttctggatgtggccgagctggcgccg
atgctcaaccccgacacggttctgcgcgaggcgggcctggatgactgggtggcgcgcttt
gggctacaggtggaggaacgccaccacgccagcgctgatgcccaggtcaccgcagaactt
gtgctgatcctgttcagccaggcccggcgccaacaactggacagcccgctgcaactggaa
cagcgcctgcgcggctggcggcgacgcaaggtgcagagccatggcatgtaa

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