Pseudomonas juntendi: L1P09_03555
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Entry
L1P09_03555 CDS
T08267
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_03555 (phrB)
Enzymes [BR:
pju01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L1P09_03555 (phrB)
DNA repair and recombination proteins [BR:
pju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L1P09_03555 (phrB)
Prokaryotic type
L1P09_03555 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UJM13269
LinkDB
All DBs
Position
complement(772220..773641)
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AA seq
473 aa
AA seq
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MHLTWLRSDLRIDDNTALSAATERGPTIALWLVSPGQWRAHDDADCKVDFWLRNLRDLRQ
ALEKMNIPLLIRKIDTWDQAPQAVLDVCQQHQVQSVHWNEEYGINEQRRDAATRKLLEKA
SVQAHSYLDQLLFRPGTILTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAALKIH
SDPIPQHIDGFEKTPRALREHWPAGEAHAQQRLSQFLDETIDDYLKTRDLPAMPGTSQLS
PYLVAGVISPRQCLHGALAANKGELDSGSTGVQTWVNELLWREFYKHILTGYPQVSRHRA
FRSHTEALPWRDAPGDLEAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRIFNPVSQSQRFDPEGRFIR
HWLPELRDIDEKTIHGPMKSTDLFAGNSYHNPIVDLGSSRQRALEAFKGLPRR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgtagtgacctgcgcatcgatgacaacaccgcactgagcgct
gcgaccgaacgcgggccgaccatcgccttgtggctggtcagccccgggcaatggcgtgcg
cacgacgacgccgactgcaaagtcgatttctggctacgcaacctgcgcgacctgcgccag
gcgctggaaaagatgaacatcccgctgctgatccgcaagatcgacacctgggaccaggcg
cctcaggccgtactcgatgtttgccagcaacaccaggtgcaaagcgtgcactggaacgag
gaatacggcatcaacgagcagcgccgggacgctgctacgcgcaagttgctggaaaaagcg
tctgtccaggcgcacagctatctcgaccaactgctgtttcgcccaggcaccatcctgacc
cgcagtggcgattactttcaggtattcagccagttcaagaaaacctgccttgaacacctg
caccgcagcctgcctgcgctggcccggcgggtaaagcgccaggctgcgctgaagatccac
agtgacccgatcccgcaacatatcgacggcttcgaaaaaaccccgcgcgccttgcgtgag
cactggccggcgggcgaggcccatgcacagcagcgcctgtctcagtttctggacgaaacc
atcgacgattaccttaaaacccgggatctgccggcaatgccggggaccagccagctttcg
ccttatttggtcgccggggtaatttccccgcgccagtgcttgcatggggcccttgccgcc
aacaagggcgagctcgacagcggtagcacgggtgtgcagacctgggtcaacgaactgctg
tggcgcgaattctacaagcatatccttaccggctacccacaggtctcgcggcaccgcgcc
ttccgcagccataccgaagccctgccctggcgcgatgcgccgggcgatctcgaggcgtgg
gagcagggccgcaccggcttccccatcatcgacgcggccatgcgccagctgctgcacacg
ggctggatgcacaaccggctgcgcatgatcgtcgccatgttcctcagcaaaaacctgttg
atcgactggcgcaagggcgagcgtcacttcatgcgccacctcatcgatggtgacctggcc
gccaacaatggcggctggcagtggagcgcctctaccggcaccgattcggtgccctatttc
cgcattttcaacccggtctcacaatcgcagcggttcgaccctgaggggcgtttcattcgt
cactggctgccggagcttcgcgatatcgatgaaaaaacaattcatggtccgatgaaatct
acggatcttttcgctggtaattcgtatcacaatccaatagttgatctgggcagtagtcgc
caacgtgcattggaggccttcaaaggcctgccgcgacggtaa
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