Pseudomonas juntendi: L1P09_04945
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Entry
L1P09_04945 CDS
T08267
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pju
Pseudomonas juntendi
Pathway
pju03410
Base excision repair
pju03430
Mismatch repair
pju03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1P09_04945 (recJ)
03430 Mismatch repair
L1P09_04945 (recJ)
03440 Homologous recombination
L1P09_04945 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_04945 (recJ)
DNA repair and recombination proteins [BR:
pju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L1P09_04945 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L1P09_04945 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L1P09_04945 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UJM13536
LinkDB
All DBs
Position
1089854..1091563
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRPLPATLPFLGNLPPLLTRLYAARGVQSEAELDKSLARLLPYQQLKGIEAGVDLL
VAAIDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVDGVAAAKAAGLKVLVTDHHLPGEQLPDADAIINPNQPGCSF
PSKALAGVGVIFYVLMALRARLRSLGRYATQPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDPALAQDMAQQLDDLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGAGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPEANFPAFAEAFDEEVRRQLREDDLTGRLLSDGSLAVEEFHLDLAKALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDRDVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgccccctgcctgcgaccctgccttttctgggtaacctgccaccc
ttgctcacccgtttgtatgccgcacgcggcgtgcaaagcgaggccgaactggacaaaagc
cttgcgcggctgctgccctaccagcagctcaagggcatcgaggccggcgtcgacctgctg
gtcgctgccatagaccagcgccagcgcattctcattgtcggcgacttcgacgccgacggt
gccaccgcaagtacggttggggtgctgggcttgcgtttgttgggggcagcccatgtcgat
tacctggtgcccaaccgttttgaatacggttacggcctgaccccggaaatcgtcgaagtt
gccctgcagcgccagccgcagttgctgattaccgtggacaacggcatttccagcgtcgac
ggggtggccgctgccaaggccgctgggctgaaagtgctggtgaccgaccatcacttgcca
ggcgaacaactgcccgatgccgacgccatcatcaaccccaaccagccgggttgcagcttc
ccgagcaaggcgctggccggggtcggtgtcatcttctatgtgctgatggccctgcgcgcg
cggttgcgcagcctgggccgctacgcgacacaaccccagccgaacatcggtgaactgctc
gacctggtcgccctgggcagcgtggccgatgtggtgccgctggatgccaacaaccgcatc
ctggtgcaccagggcctggagcgcatccgtgccggccgtgcccgcccgggcttgaaggcc
attcttgaggtggcccgccgcgatcaccggcgcatcacctccaccgacctgggtttcatt
cttggcccacgcctgaatgcagccgggcgcctggacgacatgagcctgggcatcgaatgc
ctgctgtgcgaagacccggcgctggcccaggacatggcgcagcaactggatgacctgaac
caggaccgcaagtccatcgagcaaggcatgcagcgcgaggcgctggcccagctcaaggac
ctgccggtcgagtcgatgccttacggcttgtgcctgttcgatgccgactggcaccagggc
gtgatcggtattctggcgtcgcggctgaaggagcgttaccaccggccgaccattgccttc
gccgatgcaggcgctggcatgctgaagggctcggcgcgttctgtgccagggttccatatt
cgcgatgcgctggatgccgtggcggcgcgccacccgcaattgatcagcaagttcggcggc
cacgccatggccgctggcttgtcgttgccagaggcaaatttcccggcctttgccgaggcc
ttcgacgaagaggtacggcgccagctgcgtgaagacgacctgaccgggcgcctgctgtcc
gacggcagcctggcggtggaagaattccacctcgatctggccaaggcgctacgcaatgcc
gggccatggggccagcatttccctgagccgctgtttcatggcgtgttccagttggtggag
cagcgcgtggtgggcgagcggcacttgaaggtggtactgaagagcgagtgtggctcggtg
cggctggatggcattgccttcggcatcgaccgcgacgtatggccgaacccgacggtgcgc
tgggtcgagttggcgtacaagctggatgtgaacgagtttcggggcaatgaaagtgtgcag
ttgatgattgcccacatggaaccgcgttga
DBGET
integrated database retrieval system
