Pseudomonas juntendi: L1P09_07930
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Entry
L1P09_07930 CDS
T08267
Name
(GenBank) DEAD/DEAH box helicase
Organism
pju
Pseudomonas juntendi
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
SWIM
Glyoxalase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UJM14104
LinkDB
All DBs
Position
complement(1728610..1731927)
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AA seq
1105 aa
AA seq
DB search
MKPDAAELVNQYPNWTQSFSKATLQRAERYADEGRVELDGIYRQIITARCEGSGDNVYQQ
TIELHIAGGRCHVEGECDCPVRQNCKHCAAVLFTLSGPTISTEPVQSPPGTLSAELQHWL
SGLEQPPAHAGAADDKRGRMVCYQLQLTDTAGCSLLVRKGTRSEDGIRFSRVQSLYDFLY
EPPRFVTDQDTRILRLLAALNQGAGQDRGYQLKGQEGGELFQRALETGRMLFDVNMPLLH
EGPTRPAEFRWVRQDNGNYRGLWYSGEEPLRCVIPLLPLYYFDVQAQEVGKVEHTLDPHV
AVQLTIAPDVPEHLVVPLSHKLNALSHKVPTPAPVREQVIEDIQPQALMALGSLEYTAYM
PKTGRMQRQMQHRAALAFDYDGLQASGSDDKPLTRLAGNTSQRIRRQPQAEQALRKVLRD
FGFRPATRQSKALPDSAGEMYQLPDDEAWLHFAREGLPRLREAGWAIDTHRDFAFELQEV
EDWYATIDEAPGHEWFDLELGIVVDGQRHSLLPIVLQLLRSSPELLRPSELARRSDDEHL
LIDLNRGRLDASPLRVALPYGRIKAVMGTLGELYLHEGSVGPALRLDRADAARLNQIEGM
PLHWQGGEHVRDLGRRLRDARDLQVAPPVALRASLRAYQQQGLNWLQALREMGTGGILGD
DMGLGKTLQALAHLLLEKESGRLVSPALVVMPTSLIPNWLDEAARFAPDLRVLPLHGPGR
SKHFAKLGDYDLVLTTYALLPRDLQHLRAHAWHVLVLDEAQNIKSSTSKAALAACELQAT
QRLCLTGTPMENNLGELWSIFHFLMPGWLGELKRFNQDYRTPIERHGDSERMAHLANRVR
PFLLRRTKEQVATELPAKTEMVHWVELSDAQRDTYEAVRVAMDKKVRDEIARNGAARSQI
VILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLQMLDELLSEGRRVLLFSQFTSM
LALIEQELQKRQIRYSLLTGDTRDRRTPVQQFQQGDSEVFLISLKAGGVGLNLTAADTVI
HFDPWWNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQALQQEKAALAASLLDGG
QAGQWRLGDEEIDALFAPLPGKRGR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagatgccgccgagttggtgaaccaatacccgaactggacccagtcgttcagc
aaggccaccctgcagcgcgcagaacgctatgccgacgaaggccgggtggaactggacggt
atctaccgccagatcatcaccgcccggtgcgaaggcagcggtgacaatgtctaccaacaa
accatcgaactgcacattgcaggcggccgctgccacgtcgagggtgagtgcgactgcccg
gtacggcaaaactgcaagcattgcgctgcggtactgttcaccctcagcggccccaccatc
agtaccgagcctgtgcaaagcccgccgggtacgctgtcggccgaactgcagcactggctc
agtggcctggagcagccgccggcccatgccggcgcagccgatgacaaacgcgggcgcatg
gtctgctaccagctgcaactgaccgatactgccggctgctcgctgctggtgcgcaaaggc
acacgcagcgaggacggcatccgcttcagccgggtgcagtcgctttacgattttctctac
gagccgccgcgcttcgtcaccgaccaggacacgcgcatcctgcgcctgcttgcggcattg
aaccagggggccggccaggaccgcggctaccaactcaaaggccaggaaggcggcgaactg
ttccagcgcgcactggaaaccgggcgcatgctgttcgacgtcaacatgcccctgctgcac
gaaggcccgacgcgcccagccgagttccgctgggtacgccaggacaatggcaactaccgc
gggctgtggtacagcggtgaggaaccgctgcgctgcgtcatcccgctgctgccgctgtac
tacttcgatgtgcaggcgcaagaggtgggcaaggtcgaacacacccttgacccgcatgtg
gccgtgcaactgaccatcgcccccgatgtgccggaacaccttgtcgtccccctgagccac
aagctcaatgccctgagccacaaggtgccgaccccagcccccgtgcgagagcaagtgatc
gaggacatacagccacaggccctgatggccctcggcagcctcgagtacaccgcctacatg
ccgaaaaccgggcgcatgcaacggcagatgcaacatcgcgccgcattggcattcgactat
gacggcctgcaagccagcggtagcgacgacaagccgctgacccgccttgcaggcaacacc
agccagcgcatccgccgccagccccaggctgaacaagccctgcgcaaggtgctgcgggac
ttcggcttcaggcctgcaacccggcagagcaaggcattgcccgacagtgccggggaaatg
tatcaactgcccgacgacgaagcctggctgcactttgcccgcgaaggcctgccacgcctg
cgcgaagccggctgggccatcgatacccaccgcgatttcgccttcgaactgcaagaggtg
gaagactggtacgcgaccatcgacgaagcgccgggccatgaatggttcgacctggaactg
ggcatcgtggtcgatggccagcgccacagcctgttgccgatcgtgctgcaattgctgcgc
agcagcccagagctgttacgccccagcgaactggcccggcgcagtgacgacgagcacctg
ctgatcgacctgaaccgcggccgcctggatgcctcgcccttgcgcgtcgccctgccttat
ggccgtatcaaggcagtgatgggcaccctgggcgagctgtacctgcacgaaggcagcgta
ggcccggccctgcgcctggaccgcgccgacgccgcgcgcctgaaccagatcgaaggcatg
ccgctgcattggcaaggtggcgagcatgtgcgcgacctggggcgccgcctgcgtgacgcg
cgtgacctgcaggtcgcaccgccagtcgcgctgcgggccagcttgcgcgcctaccagcag
caaggcctgaactggctgcaggccctgcgcgaaatgggtaccggcggcattctgggcgac
gacatgggcttgggcaagaccctgcaagccttggctcacctgctgctggaaaaggaaagc
gggcgcctcgtcagcccagccctggtcgtgatgccgaccagcctgatacccaactggctg
gacgaagccgcacgcttcgcccccgacctgcgtgtactgcccctgcacgggccagggcgc
agcaagcattttgccaagctgggcgactacgacctggtcctcaccacctatgcgctgctg
ccgcgcgacctgcagcacctgcgcgcgcacgcgtggcacgtgctggtgctggacgaggca
cagaacatcaaaagcagtaccagcaaggcggccctggccgcctgcgaactgcaggccacc
cagcgtctgtgcctgaccggcacgccgatggaaaacaacctgggcgaactgtggtcgatc
ttccacttcctgatgcccggctggctgggtgaactgaagcgcttcaaccaggactaccgc
acgccgatcgagcgccacggtgacagcgagcgcatggcccacctggccaaccgcgtccgg
ccgttcctgttgcgccgcaccaaggagcaggtggccaccgagctgccggccaaaaccgag
atggtgcactgggtcgagctcagcgacgcccagcgcgacacctacgaagcggtacgcgtg
gccatggacaagaaagtccgcgatgaaattgcccgcaacggtgccgcgcgcagccagatc
gtgatcctcgacgcgctgctcaagctgcgccaggtgtgctgcgacctgcgcctggtaaaa
ggcgtggagagcaagggtaaccaggccgacaagggcaagctgggggcactgctgcaaatg
ctcgatgagctgctcagcgaaggccgccgggtactgctgttttcgcagttcacgtcgatg
cttgcactgatcgagcaggaactgcaaaagcgccagatccgctacagcctgctcaccggc
gatacccgcgaccggcgtacgccggtgcagcagttccagcagggtgacagcgaggtgttc
ctgatcagcctgaaggccggcggcgtgggcctgaacctgacggcggcagacacggtgatc
cacttcgacccctggtggaacccggccagcgaaaaccaggccaccgaccgcgcctaccgt
ataggccaggacaaaccggtgttcgtgttcaagctgattacccgcggcacggtggaagag
aaaatacaggcactgcagcaggagaaggccgcgctggcggcgagcctgctcgatggcggc
caggctgggcagtggcggctgggggatgaagagatcgatgccctgtttgcaccgttgcca
ggcaagcgtgggcgctga
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