Pseudomonas juntendi: L1P09_15175
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Entry
L1P09_15175 CDS
T08267
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pju03032
]
L1P09_15175
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_15175
Enzymes [BR:
pju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L1P09_15175
DNA replication proteins [BR:
pju03032
]
Prokaryotic type
DNA Topoisomerases
L1P09_15175
DNA repair and recombination proteins [BR:
pju03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1P09_15175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UJM10685
LinkDB
All DBs
Position
3268680..3269702
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AA seq
340 aa
AA seq
DB search
MLDCPLPRSLHYVEDSQPGLARRRWRDRFIYLDADGERVRDKDTLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHVQWRELRDQHKYGRMLAFAQVLPKLRAQLETYLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVEVKGSSIRFQFRGK
RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDADGQRHSVGSAEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLRPLAWEPEAEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYALGRLADLPKHRVRKGLDPEEVALLVFLQALEEQDGH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccctctgccgcgcagtttgcactatgtcgaagacagccagccaggcctg
gcccggcgccgttggcgcgaccgcttcatctacctggacgccgatggcgaacgggtccgg
gacaaggacaccctggcgcgcattgccgccctggtgatccccccggcctacaccgacgtg
tggatctgtgccgacccccagggccacctgcaggccaccggccgtgatgcgcgtggccgc
aagcaataccgctaccatgtgcaatggcgcgaactgcgcgaccaacacaagtacggccgc
atgctggccttcgcccaggttttgccgaaactgcgggcacaactggaaacctacctggca
cgcccagggctggaccgggaaaaggtcatggcactggtggtgagcctgctggaccacacg
ctgatccgcattggcaaccagcgctacctgcgcgacaaccagtcgtacggcctgaccacc
ctgcgcaaccgccacgtagaggtcaagggcagcagcattcgcttccagttccgcggcaag
cgcggtgtcgagcacaacgtcaccctcaatgaccggcgcctggccaacctgctcaagcgc
tgcatggaactgcccgggcaggcgctgttccagtacctggatgccgacggccagcgccat
agcgtcggctcggccgaggtcaaccagttcctgcagcaactcacaggtgccgacttcacc
gccaaggactaccgcacctgggctggcagcagcctggcgctggacctgctcaggccgttg
gcctgggaaccggaggccgaggccaaacgccaggtggccgccatcgttcgccaggtggcc
acgcgcctgggcaataccccggcggtctgccgccgctgctacatccaccccgccgtactc
gaacactacgccctgggccgcctggcggacttgccaaagcaccgcgtacgcaaaggcctg
gaccctgaagaggtggctttgctggtatttcttcaagccctagaggaacaggacggtcat
taa
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