Pseudomonas juntendi: L1P09_17845
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Entry
L1P09_17845 CDS
T08267
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pju
Pseudomonas juntendi
Pathway
pju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P09_17845 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pju03019
]
L1P09_17845 (recQ)
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_17845 (recQ)
Enzymes [BR:
pju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1P09_17845 (recQ)
Messenger RNA biogenesis [BR:
pju03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1P09_17845 (recQ)
DNA repair and recombination proteins [BR:
pju03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1P09_17845 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
HTH_40
HTH_23
GerE
HTH_29
ResIII
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
UJM11190
LinkDB
All DBs
Position
complement(3843685..3845832)
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVAAAALNSTLTAEQQRDLAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAALFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLAERRGNAGIVYCLSRKK
VDETAAFLCQQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNVQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEAEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQITAKSAWSSGGSPASQLVRAEERELWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN
DNGGTREAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ
ALDLPEDLLTEVQDAFLDGEGELPPVATIAPLFTGRVPEGVLYCVRAALAAEFEL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggacatctttggctacgacagtttccgaggg
cgccaggcagcgatcatcgaatgcgtggccaatggtggcgatgccctggtgctgatgccg
actggcggcggcaagtcgttgtgtttccaggtgccgggcctgctgcgcccaggcctgacc
gtggtggtctcgccgctgatcgcgctgatggacgaccaggtcgccacgcttgacgagctg
ggcgtagccgcagccgccctgaactccacgctcacggccgagcagcagcgcgacctggcc
gggcgcctgcgccgtggcgaagtgaaaatgctgtacctggcacccgaacgcctggtgcaa
ccgcgcatgctcgacttcctgcgcgacctggatatctcgctgttcgccatcgacgaagcc
cactgcgtttcgcaatggggccatgacttccgccccgaatacctgcaactgggccagttg
gccgcactgttcccgcatgttccgcgcattgcccttaccgccaccgccgacatgcgtacc
cgcgaagaaatcgttcagcgcctgcacttgcagggcgcagagcgcttcctgtcgagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggaagcgccgcgcaaacaattgatg
gcgttccttgccgagcgccgtggcaacgccggcatcgtttattgcctgtcgcgcaagaag
gtcgacgaaaccgccgccttcctttgccagcagggcttcccggcgctgccataccatgcc
ggcctggcggccgaaacccgcgccgccaaccagcaccgcttcctcaacgaagaggggctg
atcatggtcgccacgatcgcgttcggcatgggtatcgacaaacccaacgtacgcttcgtg
gcccacctcgacctgcccaagtcgcttgaggcctactaccaggaaaccggccgtgcaggg
cgagacggcctgccgtccgatgcctggatggcttatggcctgcaggacatggtcatgctc
aagcagatgctgcagaactccgaaggggacgaacgccacaaacgcatcgagcagcacaag
ctcgatgccatgctggcgctgtgcgaagaaacccgctgccgccgccagtcgctgctggcc
tacttcgatgaaatcctcgagcagccgtgcgggcactgtgacaactgcgtcgacaacgtc
cagacctgggatgctaccgagccggcgcgccaggccctgtcggcagtgtttcgcaccggc
cagcgctatggtgtgggccacctggtcgacgtgttgctgggcaaggacaccgaaaaggtg
cgcaatttcggccatgaaaagctgtcggttttcggcgtgggcaaaggcctggccgaagcc
gagtggcgttcgctgttccgccagctggtcgcgcgcgggctggtcgacatcgacctggag
ggctacggcggcctgcgcttgtccgacagctgccggccactgttgcgtggcgaggtcacc
ttgcaactgcgccgtgacctcaaaccgcagatcactgccaaaagcgcgtggtccagtggc
ggcagcccggccagccaactggtgcgggccgaagagcgggaattgtgggaggcattgcgc
accttgcggcgcaagctggccgaagaacacagcgtaccgccgtacgtcatcttccccgac
tccacgttgctggaaatgttgcgcagccagccggtcagcctcagcgacatggcccaggtc
agcggcgtaggcgcgcgcaagctggaacgctatggccaggcgtttcttgaggtactgaac
gacaacggcggcacccgcgaggcgccgaaggtggtgctcgacctgcgtcatgagctggtc
agcctggcccgcgccggcatgaccccagcgcaaatcgccgggcagctcaactgcagcgaa
aagaatgtgtatagcttgctggccgaggccctggggcgccaggagctgagcctggaccag
gcgctggacttgccagaagacctgctgacggaggtgcaggacgccttcctcgatggcgag
ggcgagctgccgccggttgcgaccatcgccccgctgtttaccgggcgagtgccggaaggg
gtgctgtattgcgtacgcgcggcactggcagccgagttcgagctgtag
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