Pseudomonas juntendi: L1P09_17915
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Entry
L1P09_17915 CDS
T08267
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pju03009
]
L1P09_17915
Enzymes [BR:
pju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L1P09_17915
Ribosome biogenesis [BR:
pju03009
]
Prokaryotic type
rRNA helicases
L1P09_17915
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UJM11203
LinkDB
All DBs
Position
complement(3858278..3859639)
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AA seq
453 aa
AA seq
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MQLNFPHLPEVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPLLNRLVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYIKAGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDME
RLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHD
QHKEQIVQWLLANETFDKAIIFTNTRALADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIE
RFKQGSSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYTGPKKVKASGKAAGSKKKKIEKKTGDKKA
AAKRKPTAKPKANAPLASADGLAPLKKRKPAAE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaatttcccgcacttgcctgaggttacctccgtgttctcccaattcgccctg
catgaacgcctgcttaaagccgtggccgagcttaaatttgtcgagccaaccccggtgcag
gccgcggccatccccttggccctgcaagggcgtgacctgcgcgtgaccgcgcagaccggc
agcggcaagacggcagctttcgtgctgccgctgctcaaccgcctggtcgacctgaaaggc
gggcgcgtcgaaatccgttcgctgatcctgctgcctacccgcgaactggctcagcaaacc
ctgaagcaggtgcagctgttctcgcagttcacctacatcaaggcgggcctggtcaccggc
ggtgaagacttcaaggaacaggccgccatgctgcgcaaggtgccggacgtgctgatcggc
accccgggccgtttgctcgagcaactcaacgccggcaacctcgacctgtcccacgtgcag
gtgctgatcctcgacgaagccgaccgcatgctcgacatgggcttcgccgaagacatggag
cgcctgtgcaaggagtgcgagaaccgtgagcagaccctgctgttctcggccaccaccggc
ggtgcggccctgcgcgacatcatcggcaaggtgctgaaagacccggagcacctgatgctc
aacagtgtctcgcagttggccgaaggcactcgccagcagatcatcacggccgaccacgat
cagcacaaagagcagatcgtgcagtggctgctggccaatgaaaccttcgacaaggcaatc
atcttcaccaatacccgcgccctggccgaccgtatctacggccacctggtggccaaggat
gtgaaggccttcgtactgcacggcgagaaggatcagaaggaccgcaagctggccatcgaa
cgtttcaagcagggcagctccaaggtgctggtggccaccgacgtggcggcccgtggcctg
gacatcgacggtctcgatctggtgatcaacttcgacatgccgcgcagcggcgacgagtac
gtgcaccgcgtgggccgtaccgggcgtgccggtggtgaagggttggcaatctcgcttatc
acccacaatgactggaacctgatgtccagcatcgagcgctacctcaagcagcagttcgag
cgccgcgtcatcaaggaagtgaagggcacctacaccgggccgaagaaggtcaaggcctcg
ggcaaggcggccgggagcaagaagaaaaagatcgagaaaaaaaccggcgacaagaaggcg
gccgccaagcgcaagcctaccgccaagccgaaggccaacgcgccactggccagcgccgat
ggcctggcgccgctgaagaagcgtaagcctgctgccgaataa
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