Pseudomonas juntendi: L1P09_18615
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Entry
L1P09_18615 CDS
T08267
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pju
Pseudomonas juntendi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
UJM11327
LinkDB
All DBs
Position
4005358..4010412
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AA seq
1684 aa
AA seq
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MQNNVDQRTGQYNLAIDLPVPAGNDLTGPGLPLRLSYSPFNNEDSGFGTGWRLAMTRYEP
ATRMLTLHTGESYKVTGTGAQPTIREKKIHSFHFYDDGTAADEDKGPYRVVHKSGLVEIL
TLHDKLNPIALPSKVRSPSGQGLTLHYIPESRRLARIVDDNGTLLLELQYTDGAVTVDTH
PGAGANGLPFLRYRLELKNRALVEVKLPADIGGNWRFGYTRAHGLTCLAKVSTPTGAVEE
IRYGENGDPGHVLPNIQPQRVLPRVTSHEVKPRADQPPLKTTYTYKHFDEDNNVEVEHSY
VGSNSNVSWRDDGEDNLYRASANYRYSVTAHYWKAGKVARTQTQTFNRYHLLTRQILEED
GHIEETETEFHERAGVSFDDQPRYFQLPKTITKRYKLRADASKLRLETATTLYDDYGNTT
EEVAPTGVRTTYAYYDKEGEKQPGDENGDNWACPPDPQGFVRNLKCKTVYPVPGLPGGAP
IFRSRLTYKAYPALSSLGQASEWLAPCAEQTLQVFDVQQPDEREVLLLNVERAYLNMPDN
AFLHGRPSYQVTTRYGDDSANPVRRAIESRTSRVEWSYCKVTDKEHGLEYWTDETVCGFD
LVQKTTRSAASGLHGQTVYEEDDTGNSIRRIYDPLARLKEEIVAPGQGEDESKVIHQYGL
VTHPEEGAAGLASQSSTGSTGVSTIVTFDGCSRVVTEERETQVTDTPPGARPLRQRKIVA
RRKYDELGQLSEETTFDYYDGKTLELTSTFEYDAWSQLCKTTLPNGATQHSEFSPFGESG
DIITRWVETADKPGVRQQQQVTESNNFDKPAYQYRLDEAGQIVGRQDFSYDGLARCTREE
HTFNRNGRPVSRVNQYTYDSEGRVTRNERPDQSAVLSRFALHSADPLAEQLLVERRKGAQ
PTLAWQREYDGLERLKTLAAGLQQEAYTYKENTSLLESRTTAQRTYTYHYRPTRSAQPSQ
IDVGTVPSTTFDYDTKTSAISTASDAQGKHSYSYTDQGYLLKAQWEDQDAKGYHCDYRHS
FQGLPLGYTESDGVAVNHAYNDLGQLIQTRQGDLVASFEYDTLGRLWKTTTQDLINKQRL
VCEQTYDLLGREHKREQTLTRQDGSTLIQHIVLTWQEDDQLSSRALIRDGEQLLLETFNY
DALDRLEEHRCTGTALPNNAAGRAIKSQFFVYDELNNLTECYTDFADGAADEAFYTYDGF
ILTRAEHSLQPDYPASQAFDSDAEGNLLNDEQGNRLVYDDRGRLSEVQRASDGQPLYRYR
YDGHNDLIGVRQAQEPEVSRRYQGYRLSSTREADLLTEYLYAGERPLGLQRPAQTADNRL
FVTDAANSVLGECSSDELHDNTYTAYGDSPDNDQLVGLLGFNGEARERALGWSLLGRGYR
AYNPGLMRFHSPDLAAPEAAGINPYVYCGGNPVNWHDPSGHYGMRNSMEQPYIPPKPVKP
KGDWQSWLGVALSAVFAAVSIMLLPPVGWTLRFLLGSVSAGIDIGALEESMRALLTGDET
AYNTSFWLGFIGGLLTMGTIFERLMNQGGSKAAVRRTLPGPAPAPSEGDVFFRLRVPRKA
PTRQLNLKRKIWLPGNPDASTQTMATGVGFDVATQTTKKVTFGDLATSTLPQSSISSTSS
TASSSSIGSYRLEELFAEPAIPAVTPPVSPTTYKASAGSMLGYRKKEGSLNWTPTGRSTY
IPFR
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaacaatgtcgaccaacgtacgggccagtacaacctggccattgacttgccagtg
ccggccggtaacgacctgaccggccctgggcttcccttgcgcctgtcgtacagcccgttc
aacaatgaagactcaggtttcggcaccggctggcgcctggcaatgacccgctacgagccc
gctacccgcatgcttaccctgcacacgggggaaagctacaaggtgacaggtaccggggcg
caacccaccattcgcgaaaagaaaattcacagctttcatttttacgatgacggcactgcc
gccgatgaagacaagggcccctaccgcgtggtccacaagtccggcctggtggaaatactg
accctgcacgataagctcaaccccatcgccctgccgagtaaagtccggtcgccttccggc
caggggttaacgctccactacattcccgagagccgccgactggccaggatcgtcgatgac
aatggcacgctgctgctggagctgcagtacaccgatggcgcggtcaccgttgatacgcat
ccaggtgcaggggctaacggcctgcctttcctgcgctacaggctcgagctgaaaaaccgg
gctttggtggaagtcaaactgccagctgacatcggcggtaactggcgcttcggctatacc
cgcgcccatggcctgacctgccttgcgaaagtatccacacccacgggggctgtagaagaa
attcgctacggcgagaacggcgacccgggccacgtactgcccaatatacagccgcaaaga
gtcttgccacgggtaaccagccacgaagtgaagccccgggctgatcagccaccgctgaaa
acgacctacacctacaagcacttcgatgaggacaacaacgtcgaggtggagcacagctat
gtaggtagcaacagcaatgtcagttggcgtgacgacggcgaggacaacctgtaccgggca
agtgctaactaccgctacagcgtcactgcccattactggaaagcgggcaaggtcgcccgc
acccagacccagacgttcaaccgctatcacctgctgacccggcaaatattggaagaagac
ggccatatcgaagaaaccgaaaccgagttccacgaacgcgccggcgtcagtttcgacgat
caaccccgctacttccagctgcccaagaccatcaccaaacgctacaaattacgtgctgac
gccagcaagcttcgcctggaaaccgcgaccaccctgtatgacgattatggcaacaccacc
gaagaggtagcccccaccggcgtacgcaccacttacgcttactacgacaaagagggcgaa
aagcagccaggcgatgaaaatggcgataactgggcctgcccgcccgacccccagggtttt
gtgcgcaacctcaaatgcaagaccgtctaccccgtgccagggttgcccggcggcgccccc
atttttcggagccggttgacctacaaggcctacccggcgctgtccagcctgggccaggcg
agcgaatggcttgcgccttgcgcagaacaaaccctgcaagtattcgatgttcaacagccc
gacgagcgcgaagtgctactgctaaacgtggaacgggcttacctgaacatgccagacaat
gccttcctgcatggtcggccgagttatcaggtgaccacccgttacggtgacgacagcgcc
aacccagtgcgccgggccatcgaaagccgcacttcacgtgttgagtggagctactgcaag
gtcaccgacaaggagcacggcctggaatactggaccgatgaaaccgtgtgcggctttgac
ctggtgcagaaaacgacccgttcagccgcatctggcctgcatggtcaaacggtgtacgaa
gaggatgacaccggcaacagcattcgccgcatctacgacccgctcgcacgcctgaaggaa
gaaattgttgcacccggccaaggcgaggacgagagcaaggtcatccaccagtacgggttg
gtcacccatcccgaggagggcgcagccgggctggcctcgcagtcgtccaccggcagcacg
ggcgtgagcaccatcgtcaccttcgatggctgcagccgggtggtgaccgaggagcgcgaa
acgcaagttacggataccccgccaggcgctagacccttgcggcaacgtaaaatcgttgct
cggcgcaagtacgatgaacttggccagctaagcgaagaaaccacctttgactattacgac
ggcaagaccctggagctgacctccaccttcgaatacgatgcctggagccaactgtgcaag
accacgctgcccaatggcgcgacgcaacacagtgagttttcgccgtttggtgaatcgggc
gacatcattacccgctgggtcgagacggcagacaaaccgggggttcgtcagcagcagcag
gtcaccgaaagcaataacttcgacaagccggcctatcaataccggttggacgaagcaggc
cagatcgttggccgccaagacttcagctacgacggcctggcgcgctgcacccgtgaagaa
cacacctttaaccgaaacggcaggccggtcagccgagtcaatcagtacacctacgattct
gaaggccgggtaacccgtaacgagcgacccgaccaatcggctgtgctcagccgtttcgcg
ctacacagcgctgacccgctggccgagcaactgctggtcgagcgacgcaaaggcgcccaa
cccaccctggcctggcagcgggagtacgatggtctcgaacgcctgaagacgctggcggcc
ggtttgcagcaagaagcctatacctacaaggaaaacacctcgctgttagaaagccgcacc
acggcgcagcgcacgtacacctaccactatcgccccacccgctcagcccagcccagccag
atcgatgtgggcacagtgccgagcacaacgttcgattacgacaccaaaacctcagccatc
agtacagccagcgatgcacaaggcaagcacagctatagctacaccgatcaaggctacctg
ctgaaagcccaatgggaagatcaggatgccaagggctaccactgcgactaccgacactcg
ttccaaggcttgccattggggtacaccgaaagtgacggcgttgcggtaaaccacgcctac
aacgacctgggccaactgatacagacccgtcaaggtgacctggttgcctccttcgagtac
gacacgctggggcggctctggaaaactacaacgcaggacttgatcaacaaacagaggcta
gtgtgcgagcaaacttacgaccttctaggtcgcgagcacaaacgcgaacaaaccctcacc
cggcaggatggttccaccctcatccagcacatcgtactgacgtggcaggaggatgaccaa
ctaagtagccgcgcacttatccgtgatggcgaacaactgttgctggaaaccttcaactac
gatgcactcgaccggctggaggaacaccgttgcactggcaccgccctgccgaacaacgca
gctgggcgcgctatcaagagtcagtttttcgtctacgacgagctgaataacctcacagag
tgctacaccgattttgccgacggtgcagcagacgaagctttctatacctacgacggcttc
atcctgacacgagcggagcattccctgcagcccgactacccggccagccaggcgttcgat
tccgatgctgaaggcaacctgctgaacgacgagcaaggcaaccggctggtgtacgacgac
cgtggccgcctgagtgaagtccagcgggcgagcgacgggcagcccctgtaccgttaccgc
tatgacggccacaacgacctgatcggggtgcgccaggcgcaagagccggaagtgtcgcgc
cgctaccagggctaccggttgagcagcacacgcgaagcagacctgctgaccgagtacctg
tacgccggcgagcgccctttgggcttgcaacgcccggctcaaaccgccgacaaccggcta
ttcgtcaccgacgcggccaacagcgtgctgggtgaatgcagcagtgatgaactgcacgac
aacacatacaccgcctacggcgattcaccggacaacgaccagttggtaggcttgctcggc
ttcaacggggaagcccgcgaacgggcgttgggctggtcactgctggggcgtggctaccgt
gcctacaaccctgggttgatgcgcttccacagcccggacctcgcggcgcctgaagctgcg
ggtatcaacccgtacgtgtactgcggcggcaacccggtcaactggcacgacccgagtggc
cattacggcatgcgaaacagcatggagcagccctacatcccacccaaacccgtgaagccc
aaaggcgactggcaatcctggcttggcgtggcgctgagcgctgtgtttgcggcggtcagc
atcatgcttctgccgccggtaggctggaccctgcgcttcctgctcggctcagtcagcgct
ggcatcgacattggcgcactggaggagagtatgagggcactgttgacgggggacgagacg
gcctataacacatcgttttggctcggatttattggtgggctactcacgatggggacgatt
ttcgaaaggctcatgaatcagggggggagcaaggccgccgttcgccgcacgctgcccggc
cctgcacccgcccccagtgaaggagatgttttcttcaggctgcgtgtccctagaaaagct
ccaacacgacagctaaatctcaaacgcaaaatatggctgccaggcaatccagacgcttcc
actcaaacaatggctactggcgtgggcttcgacgtggcgactcagacgaccaaaaaagta
actttcggtgatttagccacatccacattgccacaaagctcgatcagtagcacgagttcc
actgcttcaagttcttcaattggctcttaccgcttggaagagctttttgccgaacctgct
attcccgctgttaccccgcctgtatctcctactacttataaagccagtgctggctccatg
ctgggctatagaaaaaaagagggctcccttaactggacacctacaggtagatcaacctat
ataccctttagataa
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