Pseudomonas juntendi: L1P09_19420
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Entry
L1P09_19420 CDS
T08267
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pju03021
]
L1P09_19420 (rapA)
Transcription machinery [BR:
pju03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
L1P09_19420 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UJM11460
LinkDB
All DBs
Position
4172602..4175448
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFAPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLTGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFDDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSAEYALVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDTQASARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERQLHPYPVAMPEQYRELPPGEKAELYPEVAFQAQGDSTDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHVPYLQGSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEGGDSKAWDSLVADARHERERLE
AELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAKRISGGEEKILPTHVERVAEAQRRLAAEADEEL
ARLLALQAVNPSVRDSEIDALRKQREEGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacgcgccagtattccctgcgcaatgcgccgctgactcgcgtgcgcttcgcgccaggt
gaccagatcacccacttcgaaggctggaagctgaccgtacgcgaggtcgaggacatcgac
gggctgatggtctaccacggcctcgacgggcagaaccagccgcgcaccttgccggaaacc
cagctgtcgaacttcattcagttccgcctggccagcgaccgcctgtttgccgggcagatc
gaccctttggcgtggttcagcctgcgctacaacacactgcagcacaccagcaagcagatg
cagtcggcgctgtgggggctgggcggttgccgcgctcagccaatcgctcaccagttgcac
attgcccgcgaagtcgccgaccgcagcgcgccgcgggtactgctggccgacgaagtgggc
ctgggcaagaccatcgaggctggcctggtcattcaccgccagttgctgacgggccgggcc
agccgagtactgatcctggtgccggagaaccttcagcaccagtggctggtagaaatgcgc
cggcgcttcaacttgcaggtggcgctgttcgacgccgaacgtttcatcgaaagcgacgcc
agcaacccgttcgatgacgcccagttggcactggtggccctggagtggctggtagaggac
gagaaggcccaggatgcgctgtttgccgccggctgggacctgatggttgtcgatgaggct
caccacctggtctggcacgaggaccaggtcagcgccgaatacgccctggtcgagcaactg
gcccaggtgattcctggcgtactgctgcttaccgctacccccgaacagcttggccaggac
agccacttcgctcgcctgcgcctgctcgaccccaaccgtttccacgacctggccgccttc
cgcgccgaaagcgatcactaccgcccggtcgccgaagccgtgcaagagctgctcgacgaa
ggccgcctgtcgccgaaggcacacgccaccatccagggcttcctgggggctgagggcgaa
gcgctgctggccgcggtcagcgatggcgatacccaggccagcgcgcggctgatccgtgag
ctgctcgaccgccacggcaccggccgagtgctgttccgtaacacccgcgcggcggtccag
ggcttcccggagcgccaactgcacccgtacccggtggccatgcccgagcaataccgcgag
ctgccgccaggcgagaaagccgagctgtacccggaggtcgccttccaggcacagggtgac
agcaccgacgacgagcgctggtggcgtttcgacccaagggtcgactggttgatcgacacc
ctgaaaatgctcaagcgcaccaaggtgctggtcatctgtgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcattccggcctcggtgttccatgagggc
atgagcattctggagcgcgaccgggcagccgcctactttgccgatgaggagttcggcgcc
caggtgctgatctgctccgagatcggcagcgaaggccgcaacttccagttttcgcaccac
ttggtgatgttcgacctgccggcccacccggacctgctggaacaacgtatcggccgtctg
gaccgtatcggccagaagcacaccatccagttgcatgttccctacctgcagggcagcccg
caggaacgcctgttccagtggtaccacgaagcgctcaacgcgttcctcaacacctgcccg
accggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctcgaaggcggc
gacagcaaggcctgggacagcctggtggccgacgcccgtcacgaacgcgagcgcctggaa
gccgaactgcacaccggccgcgatcgcttgctggagctgaactcgggcggcgcgggtgaa
ggcgaggcgctggttgaagccatcctcgagcaggacgaccagttcgccctgccgatctac
atggaaacgctgttcgacgcctttggcatcgacagcgaagaccactccgagaacgccctc
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggt
gtgaccattacctacgaccgcgcccaggcgctgtcgcgcgaagacatgcagttcctgacc
tgggaacacccgatggtgcaaggcggcatggacctggtgctgtctggctccatgggcaat
acggccgtcgccctgatcaagaacaaggcgctcaagcccggtaccgtgctgctcgaactg
ctgttcgtcagcgaggtggtggcaccgcgaagcttgcaactgggacgttacctgccccct
gcggcactgcgctgcctgctcgatgccaacggcaacgacctggcctcgcgcgtggccttc
gaaacgctcaacgaccagcttgaaagcgtgccacgggccagtgccaacaagtttgtccag
gcgcagcgcgacgtgttggccaagcgcatcagcggtggcgaagagaagatcctgccgacc
cacgtcgagcgtgtggccgaagcccaacgccgcctggcagcggaggccgacgaagaactg
gcgcgcctgctcgccttgcaagcggtgaacccaagcgtgcgtgacagcgaaatcgacgcc
ctgcgcaagcagcgcgaagagggcctggcaatgctggaaaaagctgccctgcgcctggaa
gccattcgtgtactagtcgccggctga
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