Pseudomonas juntendi: L1P09_19815 Help Entry L1P09_19815       CDS       T08267                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pju  Pseudomonas juntendi Brite KEGG Orthology (KO) [BR:pju00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pju03400]     L1P09_19815 Enzymes [BR:pju01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      L1P09_19815     5.6.2.6  RNA 3'-5' helicase      L1P09_19815 DNA repair and recombination proteins [BR:pju03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     L1P09_19815 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WH4_Lhr WH_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 MarR_2 HTH_9 AbiEi_4 DprA_WH GntR HTH_24 HTH_IclR MarR Motif Other DBs NCBI-ProteinID:  UJM11537 LinkDB All DBs Position 4257291..4261565 Genome browser AA seq 1424 aa AA seqDB search MNLPAQQHPVLELFHPAVRTWFGRHFATVTDAQAQAWPLVHGGQSMLLAAPTGSGKTLSA FLAVLDELFCQGLAQQGQLPAQTQVVYVSPLKALSNDIRVNLQAPLEGISQALAEQGLAA PRITTAVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGREGLRNVHTVIVDEIH ALAGNKRGAHLALTLERLQALAGRPLRRIGLSATQRPVARVAQFLVGSGRPCAVVDVGHA RPRDLAIELPPVPLAAVMATDVWGLVYDRLAALAREHRTTLVFVNTRRLAERITRHLSDR LGKDAVAAHHGSLAKELRLSAEQRLKHGQLQVLVATASLELGIDIGDIDLVCQVASPGSI AAFLQRVGRASHQVDGVPKGRLFPTSRDDLIECVALLDCVRRGELEALHIPRAPLDVLAQ QIVAEACNQPWHEQALFDCLRQATPYAHLDQQHYQALLRMLAEGYNGRQGVRSAYLHRDA VSGTLRGRRGSQLTALTSGGTLPDNADYSVLLEPQALNIGSVNEDFAVESIAGDIFQLGN ASYRILRVESGRVRVEDAQGLPPTIPFWLGEAPGRSDELSAAVARLQAQLDQQLTLADGD TRAVSAWLQGTFELGEDCAEQLLDYLARTRDVLGALPSQETLVMERFFDASGGTQLIIHS PYGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFDLDEVWRYLKSGTAE ALLIQAVLEAPLFGVRWRWNASVAMALPRFVGGRKVAPQIQRMKSEDLVAAVFPDQIACL ENIAGERQIPEHPLVEQTLDDCLHEALDCTGWLALLRRMESGAVRLLCRDLPAPSPLASA ILNARPYTFLDDAPLEERRTQAVLNRRWNEVHSSDDLGALDADAIAAVAAEAWPQPRNSD EMHETLMSLGAISQAQVSANPGWNLFLRQLAKAGRALRLPREQLWLARERLNLLQAIYPA TPLEPALEQLPGFDQPIEPDNALGELLRGRLSAHGPQTLVQIAAPLGMPPQAVEQALARL EAEGYVLRGYFSPAANELQWCERHLLARIHRYTVKRLRREIEPVSLQDFMRFLFDWQHLA PDTRLRGPQAVAEVLGQLQGFPSAAAAWEAELLPARIHDYSPHWLDDACRSGQFAWSRLA ASRSGSTLSSTPLVLLPREHLGLWRSLAPAPAVQSLGARAQRVHEVLQAQGALFFDELTH DARLLPSELETALQELVGAGLVGADSFTGLRSLIAPAAKRASRTRRRGHAPLSSSMSHAG RWALLRQGTADDSQRLEHIAHALLRRYGVVCWRLLERESDVLPPWRELLRCYHRLEARGE IRGGRFIAGLAGEQFALPEAVGLLRQVRRREADGALQVVSASDPLNLIGSLLPGVKVPAV SGNRLLYRDGVPVAKRVAGRPVYLSEAPAHEQESWRQKLLRGAP NT seq 4275 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcccgcccaacagcacccggtgctcgaactgttccaccccgccgtacgcacc tggttcggccgccacttcgcaaccgttaccgatgcccaggcccaggcctggcccttggtc catggcggccagtcgatgctgttggccgcccccaccggctcgggcaagaccctgagcgcg ttcctggccgtgctcgatgaactgttctgccagggcctggcgcagcagggtcagctgccg gcgcagacccaggtggtctatgtttcgccgctcaaggcgctgtccaatgacatccgcgtc aacctgcaagccccgcttgagggtatcagccaggccctggcagaacagggcctggctgca ccccgcatcactaccgccgtgcgcaccggcgataccccgcaaaaagaacgcgccgccatg cgcaagctggcaccgcacattctggtcacgacccctgaatccctgtatgtactgatgggt tcggcgtctggtcgtgaaggcctgcgcaacgtgcatacggtaatcgtcgacgagatccac gccttggccggcaacaagcgcggggcgcatctggcactgaccctggaacgtctgcaggcc ttggcaggccggcccttgcgccgtattggcctgtctgccacacagcgcccggtggcgcgg gtggcgcagtttctggtcgggagcggccggccctgcgcggttgtcgatgttggccatgcc cggccacgcgacttggccatcgagctgccgccggtaccgttggcggcggtcatggccacc gatgtctggggcttggtctacgaccgcctggcagccctggcccgcgagcatcgcaccacc ctggtattcgtcaacacccggcgcctggctgagcgcatcacccgccacctcagcgaccgc ctgggcaaggatgccgtggccgcgcaccatggcagcctggccaaggagctgcgcctgagc gccgagcaacggctcaagcacggccagttgcaggtactggtggccaccgcttcactggag ctgggcatcgacattggcgacatcgacctggtctgccaggtggcctcgccgggttcgatt gccgccttcctgcaacgggttggccgcgccagccaccaggtcgatggcgtgccgaaaggg cgcttgttcccgacatcgcgtgacgacctgatcgagtgcgtggccctgctcgactgcgta cgccggggggaacttgaggcgctgcacataccccgggcgcccctggacgtgctggcccag cagatcgtcgccgaagcctgcaaccagccgtggcacgaacaggcgttgttcgactgcctg cgccaggccacaccttatgcccacctcgaccagcagcactaccaggccctgctgcgcatg cttgccgagggctacaacggccgccagggcgtacgcagtgcctacctgcaccgcgatgcg gtaagcggcacattgcggggccgccgcggcagccagctgaccgcgctgaccagcggtggc acccttccggacaacgccgactacagcgtattgctggagccgcaggcgctgaacattggc agcgtcaatgaagacttcgcggtggagagcatcgcaggcgacatcttccagctgggcaat gcctcgtaccgcatcctgcgcgtcgagtcgggccgggttcgggtggaggatgcccaaggg ctgccgcccaccattccgttctggctcggcgaggcgcctggccgcagcgacgaactgtcc gcggccgtggccaggctgcaggcacagcttgaccagcagctgacgctggccgacggcgat acccgcgcggtgtcggcatggttgcagggtacgttcgagctgggcgaagactgcgccgag cagttgctcgactacctggcccgtacccgcgatgtgctcggtgccctgccctcgcaggaa acgttggtgatggagcgcttcttcgatgcctccggcggcacccagctgatcatccattcg ccctacggcagccgcatcaatcgagcctggggcctggccttgcgcaaacgcttctgtcgc accttcaatttcgaactgcaggcggccgccagcgaggacgccatcgtgctgtcgctgtcc accagccacagtttcgacctcgacgaggtctggcgttacctgaaaagcggcaccgcagaa gccctcctcatacaggccgtgctcgaagcgccactgttcggtgtgcgctggcgctggaac gccagtgtcgccatggccctgccgcgcttcgtgggcgggcgcaaagtagcgccgcaaatc cagcgcatgaaaagcgaagacctggttgccgcggtatttcccgaccagatcgcctgcctg gaaaatatcgccggcgagcggcagatacccgagcacccgctggtcgagcagaccctcgac gactgcctgcacgaggccctggattgcacgggctggctggccctgttgaggcgcatggaa agcggggcagtacgcctgctgtgccgcgatctgcctgcgccatcgccgctggcgtcggcc attctcaatgcccgcccttatacattcctcgacgacgcaccgctggaagagcggcgcacc caggcggtgctcaaccggcgctggaacgaggtgcacagcagtgacgacctgggcgcactg gacgccgacgccatcgctgccgtggccgccgaggcctggccgcagccgcgcaatagcgac gaaatgcacgaaaccttgatgagcctgggcgccatcagccaggcgcaggtcagcgccaac cctggttggaacctgttcctcaggcaactggccaaggccggccgtgccttgcgcctgccc cgtgagcagttgtggctggcccgcgagcgcctgaacctgctgcaggcgatctacccggcg acgcccctcgaaccggcgctggaacagttgcctggcttcgaccagcccatcgagcccgac aatgccctgggtgaactgctgcgtggccgcctgagcgcccatggcccgcagacgctggta cagatcgccgcgccgttgggcatgccgccacaggcagtcgaacaggccctggcccgcctg gaagccgaaggttatgtgctgcgcggctacttcagcccggccgccaacgagctgcaatgg tgcgaacgccatttgctggcgcgcatccaccgctacacggtcaagcgcttgcgtcgcgaa atcgagccggtcagcctgcaggacttcatgcgttttctgttcgactggcagcacctggca cctgacacgcggctgcgtggcccgcaggctgtagccgaagtgcttgggcagttgcagggc ttccccagtgcagccgcagcctgggaggccgaactgctgcccgcacgcatccacgactac agcccccactggctcgatgatgcgtgccgcagcgggcaattcgcctggagccggctggcc gcgagccgctcaggcagcaccttgtcgagcaccccgctggtgttgctgcctcgggagcac ctagggctgtggcgcagcctggcgcccgcgcctgccgtacagagccttggcgcacgggcg cagcgggtacatgaggtgctgcaggctcagggggcgttgttcttcgacgaactgacccac gatgcccgcctgctgcccagcgaactggaaacagcgttgcaggaactggtgggtgccggc ctggtaggtgccgacagcttcactggcctgcgcagcctgatcgccccggcggcgaaacgc gcttcacgcacccgccggcgcggccatgcaccgttgtccagcagcatgtcccatgccggg cgctgggcattgctgcgccaaggcacggcggatgacagccagcgcctggagcacatcgcc cacgccctgctaaggcgctatggcgtggtgtgctggcggctgctggagcgcgagagcgat gtactgccaccgtggcgggaactgctgcgctgctaccacaggctggaggcacgcggcgag atccgcggggggcgcttcattgccgggttggccggtgaacaatttgccttgccggaggcg gtcgggttactgcgccaggtacgccggcgcgaggcggacggcgcactgcaggtggtcagt gccagtgacccgctgaacctgatcggctcgttgctgccgggggtgaaggtgccggcggtg agcggcaaccgcctgctgtaccgcgacggcgtgccagtggccaagcgcgtggccgggcgc cctgtgtacctgagcgaggcgcccgcgcacgagcaggaaagctggcgacagaagctgctg cgcggggcaccgtaa

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