Pseudomonas juntendi: L1P09_20815
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Entry
L1P09_20815 CDS
T08267
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pju
Pseudomonas juntendi
Pathway
pju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P09_20815 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pju03019
]
L1P09_20815 (rhlB)
Enzymes [BR:
pju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L1P09_20815 (rhlB)
Messenger RNA biogenesis [BR:
pju03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1P09_20815 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
DUF5539
Motif
Other DBs
NCBI-ProteinID:
UJM11723
LinkDB
All DBs
Position
4477975..4479426
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AA seq
483 aa
AA seq
DB search
MLKALKKIFGKGEAAPQAAAPAASVAPPAPAPASEAQPAAPRANPTPKAESPVAATPVAD
KPAKDKPRRERKPKPQASLWKLEDFVVEPQEGKTRFHDFKLSSEVMHAIHDLGFPYCTPI
QAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPAPKERYMGEPRALIIAPTRE
LVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEV
HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAKQWTT
NPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNRWERVMVFANRKDEVRRIEE
KLVRDGINAAQLSGDVPQHKRIRTLENFREGRITVLVATDVAGRGIHIDGISHVINFTLP
EDPDDYVHRIGRTGRAGTNGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDELLKPVPR
KHH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcggcaagggagaggctgcaccacaggccgccgct
cctgctgccagtgtggcgccgcctgcgccggcacccgccagcgaggcgcaaccggcggcc
ccacgcgccaaccctacccccaaggcagaatcgcctgttgccgcaacgccagtggccgac
aagccggccaaggacaaaccacgtcgcgagcgcaagcccaagccccaggccagcctgtgg
aaactggaagacttcgtggtcgagccgcaggagggcaagacccgcttccacgacttcaag
ctgtccagcgaggtgatgcacgcgatccacgacctgggcttcccctactgcacgccgatc
caggcgcaggtgctgggttacaccctgcgtggccaggatgccatcggccgtgcccagacc
ggcaccggcaaaaccgcagcgtttctgatctcgatcatttcccagctgcagcagacccct
gcacccaaagagcgctacatgggtgagccgcgggcgctgatcatcgcgccaacccgcgag
ctggtggtacagatcgccaaggatgctgcggcgctgaccaagtacaccggcctgaacgtc
atgagcttcgtcggcggcatggacttcgacaagcagctcaaggccctggaagcgcgccac
tgcgacatcctggtggctacaccgggccgcctgctggacttcaaccagcggggcgaggtg
cacctggacatggtcgaagtgatggtgctggacgaagccgaccgcatgctcgacatgggc
ttcattccgcaagtgcgccagatcattcgccagacgccgcccaaaagcgagcgccagacc
ctgctgttctcggccacgttcaccgaggacgtgatgaacctggcgaagcaatggaccacc
aacccggccatcgtcgagatcgaaccggagaatgtggccagcgaaacggtcgagcagcat
gtctatgcggtggccggcagcgacaagtacaagctgctgtacaacctggtgacccagaac
cgctgggaacgggtgatggtgttcgccaaccgcaaggacgaagtgcggcgcatcgaggaa
aaactggtgcgcgacggcatcaacgccgcccaattgtcgggcgacgtgccgcaacacaag
cgtattcgtaccctggagaacttccgcgaagggcgcatcaccgttctggtcgccaccgac
gtggccgggcgcgggatccacatcgacggcatcagccacgtgatcaacttcaccctgcca
gaggacccggacgactacgtgcaccgcattggccgtaccggccgtgccggcaccaatggc
gtatcgatcagctttgccggggaagatgactcgtatcagctgccggcgatcgaagagctg
ctggggcgcaagatcaaatgcgagatgccgccggatgagctgctgaagccggtgccgcgc
aagcatcactga
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