Pseudomonas juntendi: L1P09_21645
Help
Entry
L1P09_21645 CDS
T08267
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pju
Pseudomonas juntendi
Pathway
pju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P09_21645 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pju03019
]
L1P09_21645 (pnp)
03016 Transfer RNA biogenesis [BR:
pju03016
]
L1P09_21645 (pnp)
Enzymes [BR:
pju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L1P09_21645 (pnp)
Messenger RNA biogenesis [BR:
pju03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L1P09_21645 (pnp)
Transfer RNA biogenesis [BR:
pju03016
]
Prokaryotic type
tRNA degradation factors
L1P09_21645 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
KH_2
KH_N4BP1_2nd
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
UJM11878
LinkDB
All DBs
Position
complement(4666865..4668970)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAQELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDWKPAVAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAVAKFSGEEGQPSAAEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
VIGQSRTELSANAPTMISMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagactttccagttcggtcaatcgaccgtcactctcgaaacgggc
cgtattgcccgtcaggcaaccggcgccgtgctggttactgtcgataacgacgtcaccgtg
ctggtgactgtggtaggcgccaaacaggctgatccaggcaagggcttcttcccgctgtcg
gttcactaccaggaaaagacctacgccgccggcaagatcccaggtggcttcttcaagcgt
gaaggccgtccttccgagaaagagacgctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggcttcatgaacgaagtgcaggtcgtctgcaccgtggtttccacc
agcaagaagactgacccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggtattccgttcgaaggcccgatcggcgccgcgcgcgtggccttccacgaaagcacc
ggctacctgctgaacccgacttacgagcaactggctgcctccagcctggacatggtcgtt
gccggtacttccgacgccgtgctgatggttgaatccgaagcccaggagctgaccgaagac
cagatgctgggcgcggtactgttcgcccatgacgagttccaggccgtgatccaggccgtg
aaagagctggctgccgaagcgggcaagccaacctgggactggaaacctgcggtggccaac
accgagctgttcaacgccatccgtgccgagttcggcgaagcggtttcgcaaggctacacc
atcaccgtcaaggccgaccgctatgcgcgcctgggcgagctgcgtgaccaggcggttgcc
aagttctccggtgaagaaggccagccttcggctgctgaagtaaaagacatcttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggccgc
gacaccaagaccgttcgcccgctgaacatcgaagtgggcgtgctgccgaaaacccacggt
tcggcgctgttcacccgcggtgaaacccaggccctggtggttgcgaccttgggtactgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccaccgttctcggtaggtgagtgtggccgcatgggcggcgctggccgtcgt
gaaatcggccacggccgtctggcccgtcgttcggtccaggccatgctgcctgccgccgac
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgaatccaacggttccagctcc
atggcttcggtttgcggtgcttcgctggcgctgatggacgccggtgtgccgatgaaggcg
ccagtggccggtatcgccatgggcctggtgaaggaaggcgacaagttcgcggtcctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
gtcattggccagtcgcgtaccgagctgtcggccaacgcgcctaccatgatctcgatgaag
atcgacaccgacaagatccgtgacgtgatcggtaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagattttcggc
gaaaccaaggaagcggcagatgctgccaagcagcgcatcctgggcatcaccgccgaggcc
gagatcggcaagatctacgtcggtaaggtcgagcgtatcgtcgacttcggcgccttcgtc
aatatcctgcctggcaaagacggcctggtgcacatctccatgctgagcgatgcgcgcgtc
gagaaagtcaccgatatcctgaaagaaggccaggaagttgaagtactggtgctggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgtagccgcggccaaggcctcgggc
gtttaa
DBGET
integrated database retrieval system
