Pseudomonas juntendi: L1P09_21655
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Entry
L1P09_21655 CDS
T08267
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pju03016
]
L1P09_21655 (truB)
Enzymes [BR:
pju01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L1P09_21655 (truB)
Transfer RNA biogenesis [BR:
pju03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L1P09_21655 (truB)
Prokaryotic type
L1P09_21655 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UJM11880
LinkDB
All DBs
Position
complement(4669638..4670555)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQLGQTTNTGDAEGEVLQTREVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEALEQAHAEGGNEALDRFLMPSDS
GLQDWPMVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaacgtcagcggcatcatcctgctggacaagccg
ctgggcttcacctccaatgccgccctgcagaaagtacgctggctgctgaatgcggaaaag
gccggccacaccggtagcctcgacccgctggcaaccggcgtgctgccgttgtgctttggc
gaggcgaccaagttttcgcagtacctgctcgactccgacaagggctacgaaacggtcatg
cagctggggcagactaccaacaccggcgacgccgaaggtgaggttctgcagacccgcgag
gtgaccgttggtcgcgccgatatcgaggcggtgcttccgcgttttcgcggccccatcagc
cagataccgccgatgtactcggcactcaagcgtgatggccagccgctgtacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggttgagcgtaggttgcagcaaaggcacctatatc
cgcaccctggtggaggatattggcgaggccctgggctgcggcgcctatgttgccgagctg
cgcaggacccaggccgggcccttcgcgctggcacagacggtgaccctcgaagcgctcgaa
caggctcacgccgaaggcggcaacgaagcgctggaccgcttcctgatgccctcggacagc
ggcctgcaggactggccaatggtcagcctgtccgaacacagtgcgttctactggctgcat
gggcaggcggtacgcgcgccggacgcgccacaatttggcatggtccgggtacaggatcat
aatgcgcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcgg
cttattcggtcggaatga
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