Pseudomonas juntendi: L1P09_25005
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Entry
L1P09_25005 CDS
T08267
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pju
Pseudomonas juntendi
Pathway
pju03420
Nucleotide excision repair
pju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1P09_25005 (uvrD)
03430 Mismatch repair
L1P09_25005 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pju03400
]
L1P09_25005 (uvrD)
Enzymes [BR:
pju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1P09_25005 (uvrD)
DNA repair and recombination proteins [BR:
pju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1P09_25005 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
L1P09_25005 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UJM12504
LinkDB
All DBs
Position
5412592..5414778
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AA seq
728 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAAALGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFQHVLVDEFQDTNAVQYAWLRLLA
RGGASLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDLGEGEPLTLYAAYNEHDEARYVVETIEGLIKQGNARNDIAILYRSN
AQSRVLEEALLRERVPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQLSMWGAMCQLITAKALKGRAASALGAFIELIEGLAAKVADMPL
HTMTQTTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTEEDADLSPLSAFLGH
ASLEAGDSQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPPGLVQEVRLSNSVSRPFGAP
KTATNSHLFDNANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLML
GYAKLEAI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagacgacctctccctcctgctgaactccctcaacgatgcccaacgccaggcc
gtagcggccgcgcttgggcgtcaactggtgcttgccggcgccggttccggtaaaacccgc
gtgctggtgcaccgtatcgcctggctgatccaggtagagcaggcctcgccgcactcgatc
ctgtcggtgacgttcaccaacaaggccgccgcggaaatgcgccagcggatcgagcaattg
ctgggcatcaacccagctggcatgtgggtcggcaccttccacggcctggcccatcgcctg
ctgcgggcacactggcaggaagcgcggctggtgcagaacttccagatcctcgacagcgac
gaccaacagcgcctcatcaagcgggtgatgcgcgagctgggcctggatgaacagaagtgg
ccggcccgccaggcccagtggttcatcaacggccagaaggacgaggggctgcgcccgcaa
catatccaggccggtggcgatctgttcctggccaccatgcgcgaggtgtataccgcctac
gagcaggcctgcgaacgcgccggggtgatcgacttttccgagctgctgttgcgcgcactg
gacctgtggcgtgaccaccccggcctactggagcattaccagcggcgcttccagcacgtg
ctggtcgacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgttggcg
cgcggtggcgccagcctgatggcggtgggcgatgacgaccagtcgatctacggctggcgc
ggcgccaagatcgagaacatccaccagtacaccgccgacttccccgacgccgaaatgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggctgccaacgcgctgatt
gccaacaacagcgggcgcttgggcaaagagctgtggaccgacctgggtgaaggcgaaccc
ctgaccctgtacgcggcctacaacgagcacgacgaagcacgctacgtggtggaaaccatc
gaaggcctgatcaagcagggtaacgcgcgcaacgacatcgccatcctgtaccgctccaac
gcccagtcacgggtgctggaagaagccttgctgcgcgaacgcgtgccgtaccgcatctat
ggcggccaacgcttcttcgagcgcgccgaaatcaagaacgccatggcctacctgcgcttg
atcgaagggcgtggcaacgatgccgcactggagcgggtaatcaacgtacccccacgcggc
attggcgaaaaaaccgtggaagccatccgcgagcacgcccgccacagccagctttccatg
tggggggccatgtgccagctgatcaccgccaaggcgttgaaaggccgcgccgccagcgca
ttgggggccttcatcgaactgatcgaagggctggctgccaaggttgcggacatgccgctg
cataccatgacccagaccaccatcgagcagtccgggctgattacctatcaccaggaagaa
aagggtgaaaagggccaggcacgggtagaaaaccttgaggaactggtcagcgcagcgcgc
aacttcgaatccaccgaagaagatgccgacctctctccgctctcggctttcctcggccat
gcttcgctggaagccggcgacagccaggcggacgaacatgaggacagcatccagctgatg
accttgcacagcgccaagggcctggagttcccctacgtattcctggtcggcatggaagaa
gggctgttcccgcacaagatgagccttgaggaacctggccgcctggaagaggaacgtcgc
ctggcctatgtcggcatcacccgtgcgatgcgccaactggtcatgacatatgccgaaaca
cgccgcctgtatggcagcgaaacctacaacaaggtgtcgcgcttcgttcgcgaaattcca
ccggggctggttcaggaagtacgcctttccaacagcgtcagccgcccgttcggcgccccc
aagacagccaccaacagccacctgttcgacaatgccaacatcccgcaaaccgccttcaac
ctcggccagcgggtgcagcacgcggtgtttggcgaaggtgtgatcctcaacttcgagggc
tccggcgcccaggcacgggtgcaggtgaattttgccgaaggcagcaaatggctgatgctg
gggtatgccaaactcgaggcgatctga
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