Paenibacillus kyungheensis: PQ456_00495
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Entry
PQ456_00495 CDS
T08956
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pka
Paenibacillus kyungheensis
Pathway
pka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ456_00495 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pka03021
]
PQ456_00495 (rho)
03019 Messenger RNA biogenesis [BR:
pka03019
]
PQ456_00495 (rho)
Transcription machinery [BR:
pka03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PQ456_00495 (rho)
Messenger RNA biogenesis [BR:
pka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PQ456_00495 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
ATPase_2
OB_RNB
AAA_22
Spore_III_AA
S1CSD-TOTE-2
NB-ARC
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WCT56050
UniProt:
A0AAX3M1S2
LinkDB
All DBs
Position
119497..120855
Genome browser
AA seq
452 aa
AA seq
DB search
MDLQISDLEEMKLTDLYKLAKQYQIPYYGQLKKKELIFAILRAQAEKSGLMFMQGVLEIL
PEGYGFLRPINYLPSHEDIYISASQIRKFDLRTGDLVSGKCRAPKENERYFGLLQVNAVN
GTSPEQAAERLHFPALTPLYPQEKLVLETAQNKLSTRIMDVLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIDLFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVA
ELVLERALRLVEHKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGA
ARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRS
GTRREEDLLGKEELDTIWHIRKNMNETPDFVDGFLKKMRNTETNKEFLASFDTAEETNAK
GKSSSAKKPANSSTSSSPGRRPTRSTASASTK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaatttccgatttggaagaaatgaagctgactgatctgtataagctagcc
aaacagtatcagattccttattatggacagctcaagaaaaaagaattgatttttgctatc
ttgcgcgcacaagctgaaaaaagtggtttgatgtttatgcaaggtgtacttgaaatttta
cctgaaggttacggatttttacgaccaattaattatcttcccagtcatgaagatatctat
atttcagcctcacagattcgtaagttcgatcttcgtacaggtgatctagtatctggtaaa
tgtagagcgccaaaagaaaatgaacgttactttggattacttcaagtcaatgcagtcaat
ggaacaagccctgaacaagccgcagagcgtcttcatttcccagcattaactcctctttat
ccacaggaaaaattagtattagaaaccgctcaaaacaaactatcaactcgtattatggat
gttcttgcaccggttggactaggacaacgtggtctaattgttgcacctcccaaagcaggt
aaaacattgcttcttaaagagattgctaacagcatctccaccaacaatcccgagattgat
ttgtttgtattattaattgatgagcgtcctgaggaagtaacggatatgcagcgttcggtc
aaaggtgaagtagttgcttctacatttgacgaattgccagaaaatcatattaaagtagct
gaattggtacttgaacgcgcacttcgtcttgtagaacacaaaaaagacgttgttattttg
ttagatagtattactcgtctggcacgcgcgtataacctggttattccaccatctggacgt
acactaagcggtggtatagatccagcagctttccatcgtccgaagcgtttctttggtgct
gcccgtaatgtagaagaaggcggtagtcttacaattctcgctacagctttgatcgataca
ggttcacgtatggatgatattatctacgaagaatttaaaggtacaggtaatatggaactt
catttggatcgcaaattggcagaacgtcgtattttcccggcaatcgatattcgtcgttcc
ggtacacgtcgtgaagaagatttgttaggtaaagaagaattagatacgatctggcatatt
cgcaaaaatatgaatgaaacccctgactttgtggatggtttcctcaaaaaaatgcgcaat
acagagactaacaaagagttcttagcatctttcgataccgctgaagaaacaaatgcaaaa
ggcaaaagcagcagtgctaaaaagccagcaaatagcagtacttcaagcagtcctggaaga
cgtccaacacgttccactgcttcagcttcaactaaataa
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