Paenibacillus kyungheensis: PQ456_06340
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Entry
PQ456_06340 CDS
T08956
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pka
Paenibacillus kyungheensis
Pathway
pka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ456_06340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pka03019
]
PQ456_06340 (recQ)
03400 DNA repair and recombination proteins [BR:
pka03400
]
PQ456_06340 (recQ)
Enzymes [BR:
pka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ456_06340 (recQ)
Messenger RNA biogenesis [BR:
pka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQ456_06340 (recQ)
DNA repair and recombination proteins [BR:
pka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQ456_06340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WCT57129
UniProt:
A0AAX3M4D7
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All DBs
Position
1461483..1463366
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AA seq
627 aa
AA seq
DB search
MSVQAPVMQEAQTLLQKYFGYEDFREGQRKIVNSLLQRQDTLGIMPTGGGKSICYQIPAM
VNDGVTLVISPLISLMKDQVDALTAAGIPAAYINSTLTGKEVNERIRASRRGDLKLLYVA
PERLELDWFREEMNGVNITCIAVDEAHCVSQWGHDFRTSYLEISPFVNQLPQRPIVAAFT
ATATPEVRDDILRLLKLDDPQVFITGLGRDNLAMAVMRGTQRRDFVIDYAKSHDNESGII
YAATRKDVDDLYSRLLSSGVAAGRYHAGMSDDERDQSQEAFIYDDIRVIVATNAFGMGID
KSNVRYVIHYNMPKNMEAYIQEAGRAGRDGDPSECILLFSPQDIMTQKFLLEQNMHEGDR
KHNDYRKMQQMVDYCYTTKCLRNAMLDYFHEEHSGEPCGQCSSCRDARELVDMTIDAQKI
FSCIHRLRERFGVSVVAQVLKGSRNKKVLQYQFDQLPTHGLMSHLSEKEISERINVLAAE
GYLLLTEGQYPVVKLQPIAAEVLKGQRKVMQRAPRPIATSASSSSGSSRSRSTSRNNDAS
AVNETIFEQLRLIRRELASREGVPSYIIFNDATLREMSVVEPQSEGEMLEIKGVGEVKFR
KYGEPFLAFFQKESMDMHQGRYDMEEF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcaagcgcctgtgatgcaggaagcacagactttgttacagaagtattttgga
tatgaagattttagagaaggtcaacggaagattgtaaatagtctattacaacgtcaggat
acgctcggaattatgcctacaggtggcggtaagtcgatctgttatcagattccagcgatg
gttaatgacggagtgacgctagttatttcaccgctgatctcactgatgaaagatcaggtc
gatgcacttacagcggcagggattccagcggcttatattaatagcacgttaacaggtaaa
gaagtgaatgaacggattcgagcttcacgtcgtggcgacctgaagttattatatgttgca
cccgagcgcttagaactggattggttccgcgaagaaatgaacggtgtgaatattacgtgt
atcgctgtcgatgaagcacactgtgtatcgcagtggggtcatgatttccgtaccagttat
cttgagatttcaccatttgtaaatcaattgccacagcgtccaatcgttgccgcttttaca
gcaactgcaacaccggaagtgcgtgacgatattttgcgtcttttaaaattagatgatccg
caggtatttattacaggattgggtcgggataatctagcgatggcggtcatgcgtggtacg
cagagacgtgactttgtgatcgattatgccaagtctcatgacaatgaatccggtattatt
tatgcggctacccgtaaagatgtagatgatctgtatagtcgtctgcttagtagtggggta
gcggctggacgttatcatgccggaatgagtgatgatgaacgggatcagagtcaggaagct
tttatttatgatgatattcgcgtaattgtggctacgaatgcatttggaatgggtatcgac
aagtctaacgttcggtatgttattcattataatatgcctaaaaatatggaagcttatatt
caagaagcaggtcgtgcaggtcgtgatggtgatcctagtgaatgtatcctattatttagc
ccgcaagatattatgactcagaaatttttactggaacaaaatatgcatgaaggtgatcgc
aaacataacgattatcgcaaaatgcaacagatggtcgattactgttatacaaccaaatgt
ctacgtaatgcgatgcttgattattttcatgaagaacattccggtgaaccctgcggacaa
tgtagctcttgccgggatgctcgcgagttagtcgatatgacgatcgatgcgcagaaaatc
ttctcctgtattcatcgtctacgtgaacgattcggtgtctcggtggtagcgcaagtactc
aaaggttcacgtaacaaaaaagtactgcaatatcagttcgatcaattgcctactcatgga
ttaatgtctcatttatcagaaaaagaaatctctgagcggatcaatgtactggcagccgaa
ggatatctgttgctaaccgaaggacaatatccggtggtaaaattgcaaccgatcgcagcc
gaagtgctcaaaggacagcgtaaagtcatgcaacgtgcaccacgtccaatagcgacttca
gcttcaagtagttcaggttctagccgtagtcgtagcactagccgtaataacgatgcttca
gcagttaacgagacaatcttcgagcaattgcgtctgattcgtcgtgaactggcatcacgt
gaaggtgtaccatcttatattattttcaatgatgcaacattgcgtgaaatgagtgttgtc
gaaccgcaaagcgaaggcgaaatgctggagatcaaaggggtcggcgaagtgaaattccgc
aaatatggcgaaccatttttagcctttttccagaaagaaagtatggatatgcatcaagga
cgttacgatatggaagaattttaa
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