Paenibacillus kyungheensis: PQ456_07265
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Entry
PQ456_07265 CDS
T08956
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pka
Paenibacillus kyungheensis
Pathway
pka03030
DNA replication
pka03430
Mismatch repair
pka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ456_07265
03430 Mismatch repair
PQ456_07265
03440 Homologous recombination
PQ456_07265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pka03032
]
PQ456_07265
03400 DNA repair and recombination proteins [BR:
pka03400
]
PQ456_07265
Enzymes [BR:
pka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ456_07265
DNA replication proteins [BR:
pka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ456_07265
DNA repair and recombination proteins [BR:
pka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ456_07265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WCT57298
UniProt:
A0AAX3M7I5
LinkDB
All DBs
Position
1661108..1664896
Genome browser
AA seq
1262 aa
AA seq
DB search
MTPFVHLHVHSEYSLLDGAARIKDLVSQAAESGMTALALTDHGVMYGAIPFYKACKQHGI
KPIIGCEVYYTAGSRKEKAARKDQPIHHLLLLAKNEIGYRNLMKLSSIGHLEGFHYKPRV
DAEVLQQYHEGIICLSACLGGEIPQHLLHEQPEEARKAALRYQAIFGEDFYIELQDHHIP
EQKKVMPLLIDLARELHIPLVATNDVHYLTEEDAKTQDVLICIGTGKTMDDEGRFRIPTN
QLYLKDSQQMESLFRHVPEAITNTTVIADRCELELTFGESLLPSYYPIPDELSPERYLEQ
LCRTGLEQRYQDTVYWNDPQERQTIEERLSYELKVIGSMGFADYFLIVWDFMKYAHSQGI
VTGPGRGSSAGSLVAYVLEITNVDPIKYKLLFERFLNPERITMPDIDIDFSDLRRDEVIE
YVVSKYGRDHVAQIITFGTLAARAAVRDVGRALNVPYADTDKAAKLIPAQVGMTISKALD
QVPELRDRYEKSAPVREMIDTALKVEGMPRHASTHAAGVVISSGVLTDIVPIQEGSEIAV
LTQYPMESLESIGMLKMDFLGLRTLSIMERCMTWIEEQEGHPVDFAQIEDNDPQTYEMLS
QGDAMGVFQMESPGVRRVLRDLKPTAFEDIVSVVALYRPGPMDFIPKYIESKHGRTIPEY
PHPDLEPILSDTYGIIVYQEQIMQIASQMAGFTLAEADLLRRAVSKKKREILDEERVHFV
KGSIEQSYTEEEANVVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFIASMLT
AVMGTHRKVAEYVLECRRIGIDVLPPDVNTSGVTFTPVTAAMQQELEQQLLAKASESDGE
QLQVTEPSEPSKSSTPSITGNIRFGLGAVKNVGTQAINSIIKERQDRPYDSLIDFCRRVD
PKACNKRVIESLIQAGAFDSLPGHRAQLLTMLDDTIKEAAKWRKEREELQIEMFADLGFV
ETHNWEVSYPDVAPYTTGEQLEFERELLGLYLSGHPLDDYEQVIEDTGLSRLMNLHEGED
ESIVAVAGMVVSLKMITTKQGKSMAFMELEDQIERCEVVLFPEVWRKSSTLVDKGLLLSV
RGKLQKEEDGFKLLAEEVATLNEGSARELATRARQRMHIAKNKASSQTKQANKSTSSSAS
KPYAKSTTSAPKVAADHQETASASSGGGVASVVNDAPHTDRNPEPVSKQRVFIKITKESQ
QADKLAALKQLLASHAGPVGTLLFYEETQKLFDLSETYSIKPSPELFQEMEQMLGEGTVK
VK
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatttgttcacctgcatgtgcatagcgaatacagtctactggacggggctgcg
cgcataaaggatcttgtcagccaagccgcagaatcaggcatgacagcactagctctcacc
gatcatggtgtaatgtacggagctattccattttataaagcatgtaagcaacatggcatt
aaaccgattatcggttgcgaagtgtattatacggctggatcacgcaaagaaaaggcagca
cgcaaagatcaaccgattcaccatttattattgttagccaaaaatgaaatcggttatcgc
aatctgatgaaactgagttcgattggacatttagagggattccactataagcctcgtgtc
gatgctgaagtgttacaacagtatcacgaaggtattatttgtctgagtgcttgtcttgga
ggagagattccgcaacatttattacatgaacaaccggaagaagctagaaaagccgctctt
cgttatcaagcgattttcggtgaagatttctatatagaattgcaagaccatcatattcca
gaacagaaaaaagtcatgccgttattaatcgatcttgccagagaacttcatattccactg
gtagctacgaatgatgtgcattatttaacggaagaagatgccaaaacgcaggatgtctta
atctgtattggtacaggtaaaacgatggatgatgaaggtcgttttcgaattccaactaat
cagttgtatctaaaagacagtcagcagatggaatccttattccgtcatgttcctgaagcg
attaccaatacaacagtgatcgccgatcgttgtgaattggaactgacttttggcgagtcg
ttattaccttcgtattatccgattcctgatgagctatcaccggaacgttatctggaacaa
ttatgtcgtacaggcttagagcaacgttatcaagatacggtgtactggaatgatcctcaa
gaacgtcagacgattgaagaacgattaagttatgaattgaaagtgataggcagtatggga
tttgcagattatttcctgattgtatgggattttatgaaatatgcccattctcaaggtatc
gtcacaggcccgggacggggatcttcagcaggtagtctggttgcgtatgtactggaaatt
accaatgtcgatccgatcaaatataagctgttattcgagcgttttctcaatccagagcgg
atcactatgcctgatattgatatcgattttagtgatctacgtcgtgatgaagtcatcgaa
tatgttgtttccaaatatggaagagatcatgttgctcagattatcacatttggtacatta
gctgcgcgtgcagccgtacgagatgtaggacgagcactgaatgttccttatgccgataca
gacaaagctgccaagttaattccggcgcaagtaggcatgacgatcagcaaagcattagat
caagtacctgaattacgtgatcggtatgaaaagtctgcacctgttcgtgaaatgattgat
accgcgctcaaagtagaaggtatgccacgtcatgcttctactcatgccgcaggcgttgtg
atttcaagcggagtgttaaccgatattgttccgattcaagaaggtagcgagattgctgta
ttgactcaatatccgatggaaagcttggaatcaataggtatgctcaaaatggactttttg
ggtctacgtacgttatcgattatggaacgctgtatgacatggatcgaagaacaagaaggt
catccggttgattttgcgcagattgaagataatgatcctcagacctatgaaatgctcagt
caaggtgatgcaatgggcgtattccagatggaatcaccgggtgtaagacgggtgctacgc
gatctcaaaccgaccgcttttgaagatattgtctcggtcgttgccttgtatcgtccgggt
ccaatggactttattcctaaatatatcgaatccaagcatggtcgcacgattccagaatat
ccgcatcctgatttggagcctattctaagcgatacgtatggcattatcgtgtatcaggaa
cagattatgcagattgcttctcagatggctggttttacactggctgaagccgatttgtta
cgtcgcgcagtctccaagaaaaagcgtgagattctagatgaagaacgggtgcattttgtt
aaaggaagtatagaacagtcttataccgaagaagaagccaatgtagtatacgatatgatc
gtacgatttgcagattatggattcccaagagcacatgcggcggcatatggtgtgcttgcg
tttcagaccgcttatctcaaagcacattaccctgtgcaatttatcgcttcgatgttaaca
gcagtcatgggaacgcatcgcaaagttgccgagtatgtactggaatgtcgtcgtatcggg
attgatgtattaccacctgacgtgaatacgagtggagttacatttacaccggtaaccgca
gcgatgcaacaggagttagaacagcaattgttagccaaagcatcggagtcagatggcgaa
cagctacaagtgactgaaccatctgaaccgtccaaatcttctacgccttctattacaggt
aatattcgcttcggtctcggtgctgtcaaaaatgtcggtacacaagcgatcaatagcatt
atcaaagaacgtcaagatcgtccttacgacagcctgatcgacttttgccgtcgtgtcgat
cccaaagcttgtaataaacgggtcatcgagtctttgattcaagcaggagcttttgatagt
cttcccggacatcgtgcacagttgcttacaatgctcgatgatacgatcaaagaagcggcc
aaatggcgcaaagaacgtgaagaattgcagattgaaatgtttgccgatctaggatttgta
gagactcataactgggaagtttcttatcctgatgtagcgccttatacaacgggcgaacag
cttgaatttgaacgtgaattgttagggctgtatctatccggtcatccattagatgattat
gaacaggtaattgaagatacaggattatctcgattaatgaatctacatgaaggtgaagat
gagagcatagtagcggtagctggcatggtcgtatcgctcaaaatgattacgaccaagcaa
ggtaaatcgatggcttttatggaactagaagatcagattgaacggtgtgaagtggttctt
ttcccggaagtatggcgcaaaagcagtacacttgtagataaaggattactgctcagcgta
cgtggtaaattgcaaaaagaagaggacggattcaaattgttagcagaagaagtagctact
cttaacgaaggatctgcccgcgagttagcgactagagctcgtcaacggatgcatatcgcc
aaaaataaagcttccagtcagaccaagcaagctaacaaatcaacatccagttcggcttct
aagccttatgccaaaagtacaacgtctgccccaaaggtagccgctgatcatcaggagaca
gcatctgcttcatccggtggtggtgtagcaagtgtggtaaacgatgctcctcataccgac
cggaatcctgaaccggtatcgaaacaacgtgtatttatcaaaattactaaagagtctcaa
caagcagataaactagccgcactaaaacaactgctggcaagtcatgctgggcctgtaggt
acattactattttacgaggaaacgcaaaagttattcgatctcagtgaaacctatagtatt
aagccttcaccagagcttttccaggaaatggagcagatgttaggcgaaggaaccgttaaa
gttaaataa
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integrated database retrieval system
