Paenibacillus kyungheensis: PQ456_08885
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Entry
PQ456_08885 CDS
T08956
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pka
Paenibacillus kyungheensis
Pathway
pka02020
Two-component system
pka02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PQ456_08885
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PQ456_08885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pka03021
]
PQ456_08885
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pka02035
]
PQ456_08885
Transcription machinery [BR:
pka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PQ456_08885
Bacterial motility proteins [BR:
pka02035
]
Flagellar system
Flagellar assembly proteins
Stator
PQ456_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
Sigma70_ECF
PhyR_sigma-like
7TMR-HDED
GerE
HTH_23
HTH_5
CtpB_N-like
Motif
Other DBs
NCBI-ProteinID:
WCT57608
UniProt:
A0AAX3M6T2
LinkDB
All DBs
Position
1997110..1997898
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AA seq
262 aa
AA seq
DB search
MSEQKATHLNHSELWVQWKEYGNVEAKKKLIENYYGTVEYVSSRLAIGLPKNVSKDDLMS
NGVMGLIDAIEKFDYKRGLQFETYASWRVRGAILDGLRQGDWVPRSVREKARKIEDAYQQ
LEQKYLRSVSDAEISNYLDITEKDFQNMLQDVAVMTITSLEDPIREEESETRMSLIVDEK
AKNPDRTVNDFVLKESLMKGIEKLTDKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGALDKQKGLLMQDM
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagcaaaaagcaacccatctaaatcattcagagttgtgggtacagtggaaggag
tatggaaacgtcgaagccaagaagaagctaattgaaaactactatggcaccgttgaatat
gtttccagccgccttgcaattggattacccaaaaatgtctctaaagatgatctgatgagt
aatggagttatgggtttaattgatgcaattgaaaagtttgattataaacgtggacttcaa
tttgaaacatatgcttcttggagagtacgtggtgcgatattggatggtcttcgtcaagga
gattgggttccaagatcggtacgcgagaaagcacgcaaaattgaagacgcctatcagcaa
ttggaacaaaaatatctacgttctgtatcggatgcagaaattagtaactatttggatatt
acagaaaaagactttcaaaatatgcttcaagatgtagcggttatgacgattacttcattg
gaagatcctattcgtgaagaagagtctgaaacaagaatgtctttgatcgtagatgagaaa
gccaaaaatccagatcgtactgtaaacgattttgtacttaaagaatcgcttatgaaaggt
attgaaaagcttaccgataaagagagaacggttgtatcactactttattatgaagaccta
tcactcagtgagattgctgaagtcatgtcattatcaccatcacgaatctctcaacttcat
tccaaagctattctacgattacgtggagcactggataagcaaaaaggtctattaatgcaa
gacatgtga
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