Paenibacillus kyungheensis: PQ456_09105
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Entry
PQ456_09105 CDS
T08956
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pka
Paenibacillus kyungheensis
Pathway
pka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ456_09105 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pka03019
]
PQ456_09105 (rny)
Messenger RNA biogenesis [BR:
pka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PQ456_09105 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
WCT57649
UniProt:
A0AAX3M621
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All DBs
Position
2049129..2050670
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AA seq
513 aa
AA seq
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MEVLWTTILVVAALFFGFLVGYFIRKSLAEAKISSAEQAAIQIVESAKKEAEAQKKETVL
EAKDEVHKLRTEAEKDIRERRNENQRLERRLLQKEESLDKKIESLERKEEQVANKEKRIE
ETQQQIEQLHTSQVAELERISNLSMEDARGIILSNVEQEVRHETSQMIKDIEQQAKNEAD
KRSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVDKARREVDERIREYGEQST
FEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMASELGQDITLAKRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDTEATSIIAMLVGAADALS
AARPGARRETLETYIRRLEKLEEISESFEGVEKSYAIQAGREIRVMVQPDKVDDADSFRL
ARDITKMIENELDYPGHIKVTVIRETRAVDYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctctggaccacaattctcgttgttgccgcattattctttgggttcttggtc
ggatattttattcgcaagtctcttgcagaagctaaaatttctagtgctgaacaagctgct
atccaaatcgtagaaagtgcgaagaaagaagcagaagcacaaaagaaagaaacagttctg
gaagcaaaagacgaagtgcacaaactcagaactgaagctgaaaaagacattcgtgagcgt
cgtaatgaaaatcaacgcctggaaagacgattgttgcagaaggaagagtcgctggataaa
aaaattgaatcattagaacgcaaagaagaacaagtggctaacaaagagaaacgtattgaa
gagactcagcaacaaatcgaacaacttcacaccagtcaggttgcggaactcgaacgaatt
tctaatctgtcgatggaagatgctcgtggtatcattttgagcaacgtggagcaggaagtt
cgccacgaaacatcacaaatgatcaaggatattgaacaacaggcgaaaaatgaagcagac
aaacgttctcgtgagattattactcttgctattcaacgttgtgctgctgatcatgtagcc
gagactaccgtctctgttgtcaccttgcctaatgaagaaatgaaaggcagaattatcggt
cgtgaaggtcgtaacattcgtgcattggagacacttacaggtatcgatttaattatcgat
gatacaccggaagctgttatcctttctggatttgacccgattcgccgtgaaattgcccgt
acagctcttgaaaaactggtagcagatggacgtatacatcctgcaagaattgaagaaatg
gtggataaagcacgccgcgaagtggatgagcgtatccgtgaatacggtgagcaatctaca
tttgaagttggcgtacatggacttcatccagatcttatcaaaattttgggtcgtctcaaa
ttccgtaccagttacggtcaaaacgtactcaagcactccatggaagtggcttatcttacc
ggcctaatggcttccgaattgggacaagatatcacattagcgaaacgtgcaggcttactg
catgatatcggtaaagcactagatcacgaagtggaaggttctcatgtagagattggcgta
gagttggctaagaaatacaaagaacatccagtcgttattaacagtattgcgtctcaccat
ggcgatacggaagccacttctattatagcgatgcttgttggtgcagcagatgcattgtct
gccgcaagaccaggcgcacgtcgtgaaacattagaaacgtatatccgtcgtctggagaaa
ctagaagaaatctctgaatcctttgaaggcgtagagaaatcttatgctattcaagccgga
cgcgaaattcgtgttatggttcaaccggataaagtggatgatgcagatagtttccgtttg
gcgcgcgatattaccaaaatgatcgaaaatgaactggattatccaggacatatcaaagtc
actgtaatccgtgaaacgagagcagtcgattacgcaaaataa
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