Paenibacillus kyungheensis: PQ456_15670
Help
Entry
PQ456_15670 CDS
T08956
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pka
Paenibacillus kyungheensis
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pka03400
]
PQ456_15670 (addB)
Enzymes [BR:
pka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ456_15670 (addB)
DNA repair and recombination proteins [BR:
pka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PQ456_15670 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
WCT54627
UniProt:
A0AAX3LXR5
LinkDB
All DBs
Position
complement(3658871..3662422)
Genome browser
AA seq
1183 aa
AA seq
DB search
MPLHFLLGRSGSGKTTTITKRIIDNITQQPDGSPILLLVPEQGSFQAQYALVRSHQSKGN
VRVQTYGFRRLANWVLQDVGGSAKTPIGEEGKKMLLYRLIQRHQSQLRMFGTSSDQFGFI
GKLSELYNEFKRHTITLEQLNEYSERLSTSARSPLLIDKLHDLQRIYQDFEQDLQGLYVD
GENTLTDLALAIPESQVLHNIDIWIDGFHSFTPQEYGVIAALLQKANSVTIALTLDRPYD
GEPPHELELFHQTATTYIKLKQYANAIDESFTIDVENLSENRVDIPVRFQSSPQLAHLEN
AYRSSHRWQQAPYIKQAGERQDIYTYAAPDRRSEVESAIREMIRLAREEGARWQEMGVFV
RQLSDYEHIIAPLLQDYEIPYFLDQKRSILQHPLAEFIRSALDIVQYFWRYEDVFRCIKT
GLLLPDDGRVTTEDIDRLENVVLASGIHGSRWTDGHPWKGIPSLSLEAGDDVKEISEREL
VEGQRMQQARQLVIDPLYRFEKRIKKAKHAKEMCIALYQLLEDCNIALHLEKMSTHATAQ
GNPLRAREHIQIYGEIIDLLDQMVDIMGEDQIDLGTFAGLLETGLSGIRLGIVPPAIDQV
LIGSMDRTRPMDIKYGFVLGMNEGIVPSLFPDSGILSEPERTNMLEGGLELSPGSKRLLL
NEQFLIYHALTVASSKLWLSYALTDDEDKGLLPSEVITNVHKLFPFLQHQSVVSPLSAQS
DHIASLQYVSTATTTLPHLIAQLREWSRGTTIANTWWHVLNWYTTHEAWRPQVSMLVQSL
FYRNTGDLLDSDTSRHLYGQTLRTSVSGMEQFVSCPFAHFASRGLRLRERQEYRLKAPDI
GQLFHASLTDLATMLKEQGRAWGQLTREECVEIAYEAVDKHIPRLQGQILSSSKRYNYIS
RKLREIVSRASVMLGEQARRGDFEPLYLELAFGPNGEWPPLRFTLENGCTMEIVGRIDRV
DVAEGDNTLLLRIIDYKSSQTDLKLHEVYYGLALQMLTYLDVLLTHAEEQLGQSAQPAGA
LYFHVHNPMLQAGNGLSMQQSEQEMLKRFKMKGLLLADRDVIGKMDNELDKGYSAILPVA
VKADGGFYSSSAVATVDQWQELLRNVRQTAQEIGTQITDGTTQITPYRIEQEKACDYCDY
KSVCQFDESLKENQYKLLQKPGKNETWELLQNRHDYQKGDSPS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgccattgcattttttattaggtcgctctggaagtggcaaaacgaccacaattactaag
cgaatcattgataatattacacaacaacctgatggatcgcctatcttgctactggttcct
gaacagggttcttttcaagcccaatatgcacttgttcgttctcatcaatccaaaggaaat
gtacgtgtacaaacgtatggttttcgccgtctagcgaattgggtgctacaagatgtaggt
ggaagtgccaaaacaccgattggtgaagaaggtaaaaaaatgcttctttatcgacttatt
cagcgacatcaatcgcaattacggatgtttggtacgtctagtgatcagttcgggtttatc
ggtaaattaagtgaattatataatgaatttaagcgtcatacgattactttagagcagtta
aatgaatatagtgaacggttgtcgacttcagctcgttctcctttattaattgataaattg
catgatttacaacggatttatcaagactttgaacaggatttgcaaggattgtatgtagat
ggagaaaatactttaaccgatcttgcgctagcgattccagaatcacaggtacttcataat
attgatatttggatcgatggatttcatagctttacaccacaagaatatggtgtgattgca
gcattattgcaaaaagccaattcagtgacgattgctttaacattagatcgtccttatgat
ggtgaacctcctcatgaattggaactttttcaccagacagctactacctatatcaaatta
aagcagtatgctaacgctattgatgagtcttttacgatagatgttgagaatctttcagag
aaccgtgtggatatcccagttcggtttcaatctagtccgcagttagctcatttagaaaat
gcgtatcgttcttctcatcgctggcaacaagccccttatattaagcaagctggtgaacgt
caggatatttatacgtatgctgcacctgatcgtcgttcagaagtagaaagtgctattcgg
gaaatgatccggcttgctcgtgaagaaggtgcacgatggcaagagatgggtgtatttgtc
cgtcagttgtctgattatgagcatattattgcaccgttactgcaagattatgagattcct
tattttctagatcagaagcgtagtatattgcaacatccattagcagagtttatacgttca
gcgttggatattgtgcaatatttctggcgatatgaagatgtgttccgttgtatcaaaaca
ggattgttgcttccagatgatggacgtgtgacaacagaagatatagaccgtctggaaaat
gtagtactggcttctgggattcatggatcacgctggacagatggacacccgtggaaaggc
atccctagtctttcactagaagctggtgatgatgtcaaagagatcagtgaacgtgaatta
gtagaaggacagcgtatgcaacaagcccgtcagcttgtaatcgatccgttgtaccgtttt
gagaaaagaatcaaaaaagcgaagcacgccaaagaaatgtgtatcgctctttatcagtta
ttagaagattgcaatattgcattgcatttggaaaaaatgagtacacatgctacggcacaa
ggtaatcctttacgtgctcgtgaacatattcaaatctatggcgaaattattgatttgctg
gatcaaatggttgatattatgggagaagatcagatcgatctgggaacttttgcaggctta
ctggaaacaggactcagcggtattcgattagggattgtaccgccagcgatcgatcaggtg
ttaatcggttctatggatcgtacacgccctatggatattaaatatggatttgtattaggt
atgaatgaaggaattgtgccttccctttttccagacagtggtattctaagtgaaccggaa
cgaaccaatatgttagaaggcggattagaattatctccgggtagtaaacgattgttgtta
aatgagcaatttttgatttatcatgcgctaacagtggcaagttctaagttatggcttagt
tatgcgttaacagatgatgaagataaaggactcttgccttctgaagtgattacgaatgtg
cataagttatttccttttttacaacatcaatcggtggtctctccattatcggctcagtct
gaccatatagcatctttgcaatatgtaagcactgctacaacaacgttaccgcatttgata
gctcagctacgagagtggagtcgcggaacaacgattgcaaacacatggtggcatgtattg
aattggtacactacacatgaagcatggagaccgcaggtcagtatgttagtacagtcttta
ttttatagaaatacaggtgatttgttagatagtgataccagtcgacatttgtacggacag
acgttacgtaccagtgtatctggaatggaacaatttgtatcttgtccttttgctcacttt
gcttcacgtggcttgagattgcgagagcgtcaagaatatcgcctgaaagcaccggatatc
ggtcaattatttcatgcttcattaaccgatcttgctacgatgctcaaagagcaaggacgc
gcatggggacaattaactcgtgaagaatgtgtagagattgcgtatgaagccgtcgataag
catattccacgtctgcaaggacagattctttccagttccaagcgatataattatatttca
cgtaaattgcgtgagattgtaagtcgtgcttctgtgatgttaggagagcaagcacgtcgt
ggagattttgagccgctctatttagaacttgcatttggacctaatggagaatggccacca
cttcgttttacactagaaaatggatgtacgatggaaattgtaggacgaattgatcgggta
gatgtagcggaaggtgataatactttattgctacggattatcgattacaagtctagccag
actgatctcaaattgcatgaagtatattacggactcgctttgcagatgctgacgtatcta
gatgtgctgttaacgcatgcagaagaacaattaggtcaatcagcgcaacctgccggcgca
ctgtatttccatgtgcataatcctatgctacaagcaggtaatggactaagcatgcaacaa
tcggagcaagaaatgctgaagcgtttcaaaatgaaaggattattgctagctgatcgtgat
gtaattggcaaaatggacaatgaactggataaaggatattctgctattttacctgtagcg
gtcaaagcagatggaggattctatagcagttctgcggttgcaacagtagatcaatggcaa
gaattactgcgtaatgtacgccagaccgcacaggaaatcggcacccaaatcacagatgga
actacacagattactccttatcgtatagaacaggaaaaagcatgtgattactgtgattac
aaatcagtctgtcaatttgatgaatctttaaaagaaaatcaatataaattactgcaaaaa
ccgggcaaaaatgaaacatgggaactgttgcaaaaccgccatgactaccagaaaggagac
tcaccttcatga
DBGET
integrated database retrieval system
