Paenibacillus kyungheensis: PQ456_20050
Help
Entry
PQ456_20050 CDS
T08956
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pka
Paenibacillus kyungheensis
Pathway
pka00260
Glycine, serine and threonine metabolism
pka00460
Cyanoamino acid metabolism
pka00630
Glyoxylate and dicarboxylate metabolism
pka00670
One carbon pool by folate
pka00680
Methane metabolism
pka01100
Metabolic pathways
pka01110
Biosynthesis of secondary metabolites
pka01120
Microbial metabolism in diverse environments
pka01200
Carbon metabolism
pka01230
Biosynthesis of amino acids
pka01240
Biosynthesis of cofactors
pka04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PQ456_20050
09102 Energy metabolism
00680 Methane metabolism
PQ456_20050
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PQ456_20050
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PQ456_20050
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PQ456_20050
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PQ456_20050
Enzymes [BR:
pka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PQ456_20050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WCT55414
UniProt:
A0AAX3LZS8
LinkDB
All DBs
Position
complement(4622893..4624143)
Genome browser
AA seq
416 aa
AA seq
DB search
MMEQLRKNDPAVLEAMGLELKRQRDNIELIASENIVSEAVIEALGSVLTNKYAEGYPGKR
YYGGCEHVDVVEDIARDRAKQLFGAEHVNVQPHSGAQANMAVYLAALKPGDTVLGMNLAH
GGHLTHGSPVNASGLLYNFVAYGVQEDTFLIDYDEVRKAAFKHRPRMIVAGASAYPRTID
FEKLASIANDVGALFMVDMAHIAGLVAAGEHPSPVPHAHFVTTTTHKTLRGPRGGMIMCT
KAWAQAIDKAVFPGSQGGPLMHVIASKAVAFGEALDPSFKTYAQNVVKNAKVLAQTLVDE
GLTIVSGGTDNHLMLVDTRSVNITGKEAEHVLDSVGITTNKNAIPFDPTSPFITSGIRLG
TPAATSRGMDEAAMVKIGQIIAMTLKSPKDEAVLAQASAQVAELTSQFPLYQQMNY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaattaagaaagaatgatccggcagtactagaagcaatgggacttgaactg
aagcgccaacgtgataatatcgaattgatcgcttctgagaacatcgttagtgaagctgtt
atcgaagctttgggttctgtattgacgaacaaatatgcagaaggttatccaggcaaacgc
tactatggtggttgtgaacatgtggatgtcgttgaagatatcgctcgtgatcgtgcgaag
caattattcggtgcagaacatgttaacgtacagcctcactctggtgcacaagcgaatatg
gcggtttacttagcagccctcaaaccaggggatactgttctagggatgaaccttgcacat
ggtggacacttaacacatggtagccctgtaaatgcttctggattgttgtataactttgta
gcttatggcgtacaagaagatacattcttgatcgattatgatgaagttcgcaaagcagca
ttcaaacaccgtcctcgtatgatcgtagctggagcaagtgcatacccgcgtacgattgat
tttgaaaaattagcttcgattgcaaatgatgtaggtgctctatttatggtggatatggcg
catatcgcaggtctggttgcagctggagaacatccaagccctgtaccacatgctcatttt
gtaacaacaacaacacacaaaacacttcgcggacctcgtggtggtatgattatgtgtacc
aaagcgtgggcacaagcgatagataaagccgtattcccgggttcacaaggtggcccattg
atgcacgtgattgcttccaaagcggtagcatttggcgaagcattagatccttctttcaaa
acgtatgctcaaaatgtagtcaaaaatgcaaaagtgcttgcacaaacattggtagacgaa
ggattgactatcgtgtctggcggtacagataatcacttaatgcttgtagatacacgcagc
gtaaatatcacaggtaaagaagcagaacatgttctggattctgtaggcatcacaacgaac
aaaaatgcgattcctttcgatccaacaagtccatttattacaagtggtatccgtctagga
acaccagcagcaacttcacgtggtatggatgaagcagctatggtgaagatcggtcagatt
attgcgatgactctcaaatctcctaaagatgaagctgttcttgcccaagcaagtgcacaa
gtagctgaacttacaagtcaatttcctttgtaccaacaaatgaattattaa
DBGET
integrated database retrieval system