Paenibacillus kyungheensis: PQ456_22520
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Entry
PQ456_22520 CDS
T08956
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pka
Paenibacillus kyungheensis
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PQ456_22520
Enzymes [BR:
pka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PQ456_22520
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WCT55886
UniProt:
A0AAX3M159
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Position
complement(5166914..5168566)
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AA seq
550 aa
AA seq
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MNKVESQARQWGWRQWLMLWIVVILIGVSSVFPTSTGHAAAIGVTDNGSTIVVNTGAGLV
YTVNKDNGDITSSKMNGIELSSSAGKGSHISSGLGSGADVTWNTSPSGATVTIITKTSTL
THYYVSRSGENIIYMATYITAEPSVGELRYIFRGNGNVLTGVPANSNIRNNTGAIESQDV
FGLSNGQTVSKYFGNDQAKDLSIRGVTGNGVGVFMAYGNREKSSGGPFFRDIQFQSGGDT
EVYNYMNSGHEQTEDWRLGLHGPYALIFTTGSTPSVPDFSWMSGLGLTGWVSSRGTVVLN
GLSGMVSGSPYTIGFANDNAQYWTTASSSGAAVRRDMIPGTYTMTVYKGELGVYKESVNV
TAGNTTTINTRTISGDPASKPALWRIGTWDGTPLEFLNGQTIAVRHPSDSRNASWGPVTY
AVGGATNKFPAIQFRGQNSPTKITFNLTAAQASLPHVLNIGITAAYNNGRPSVTVNNTIL
SNPAASTQPNSRSFTIGTYRGNNTTFSWTIPASALVEGTNTISLTPISGSSDLGNWLSAG
WVYDAVELLN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagttgaatcgcaagcaagacaatggggatggcgccaatggttgatgctgtgg
attgtagtgatattgataggtgtatcgagtgtatttcctacttctaccggacatgccgcg
gctatcggtgtaacagacaatggatcaacgattgttgtcaatacaggcgcagggctagtc
tataccgtaaacaaagacaatggagatattacatctagcaaaatgaatggaatcgaatta
agtagctccgcaggcaaaggttctcatatcagttctggtctgggatcaggggcagacgtc
acatggaatacatctccatccggtgccacagtgaccattattaccaaaacaagcacgtta
acacactattatgtctcacgtagtggcgaaaatattatttatatggcgacatatattaca
gcagagccttctgtcggagaattgcgttatattttcagaggaaatggcaatgtattaaca
ggtgttcctgccaattcgaatatccgcaacaatacaggagcgattgaaagtcaggatgtg
tttggattatctaacggtcagaccgtatccaaatattttggcaacgatcaggcgaaagat
ttgagcattcgcggtgtgactggtaatggggtaggtgtatttatggcgtatggcaatcgg
gagaaaagttcaggaggtcctttctttcgagatattcaatttcaaagtggtggagatacc
gaagtctacaactatatgaactccggtcatgagcagacagaagattggcgacttggtcta
catgggccttatgcgctgatctttactacagggtcaacgccaagtgtaccagactttagc
tggatgtctggactgggattaacaggttgggtatccagtcgtggaacagttgtattgaat
ggactatctggcatggtgagtggttcgccgtatactatcggatttgcaaatgataatgct
caatactggacaacagcatcatcgagtggagccgctgtccgtcgcgatatgatccctggc
acatataccatgaccgtctacaaaggcgagttaggtgtctataaagaaagtgtcaatgtc
accgcaggtaacacaacaacgatcaatacaagaaccatttcaggtgatcctgcaagcaaa
ccagcactatggcgtatcggcacatgggatggcacaccgctagaattcttgaatggacag
actattgctgttcgtcatccatcggatagtcgtaatgcaagttggggccctgtgacgtat
gccgtcggtggagcaaccaataagttccctgcgattcaatttagagggcaaaattcacca
actaagatcacatttaatctaacagccgctcaagcgtctttaccacatgtgctgaatatc
ggaattacagcggcatacaataatggtcgtcctagtgtgactgtgaacaacaccatatta
agtaatccagcagcctcgacacaaccgaattcacgtagctttacgattggaacctatcgt
ggcaacaacactacattttcatggacgatccccgcttccgctctagtagaaggcaccaat
acaatctcgctcactccgattagcggttcaagcgatcttggaaattggcttagtgcagga
tgggtatatgatgcggtggagttgttgaattga
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