Paenibacillus kribbensis: B4V02_01275
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Entry
B4V02_01275 CDS
T05249
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03022
Basal transcription factors
pkb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4V02_01275
09124 Replication and repair
03420 Nucleotide excision repair
B4V02_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkb03021
]
B4V02_01275
03036 Chromosome and associated proteins [BR:
pkb03036
]
B4V02_01275
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_01275
Enzymes [BR:
pkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
B4V02_01275
Transcription machinery [BR:
pkb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B4V02_01275
Chromosome and associated proteins [BR:
pkb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
B4V02_01275
DNA repair and recombination proteins [BR:
pkb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B4V02_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
Helicase_C
tRNA_U5-meth_tr
preSET_CXC
Motif
Other DBs
NCBI-ProteinID:
ASR45433
UniProt:
A0A222WHR4
LinkDB
All DBs
Position
291169..293562
Genome browser
AA seq
797 aa
AA seq
DB search
MTGTGDRMKEAIHISVRPLVEYVHRSGSIHSGFRSNSSMLEGTRVHQVIQKGYREHDRKE
VYLRTEIPYQDALFIVEGRCDGLIQLDGVWTVDEIKSISLPLEEIQGDGQPVHWAQAFLY
AYMIAREEQHHTMQVQLTYVQAHSEDIRRFRRQLSFAELESFAQEMIAGYAPYAFLLRAH
AEKRDASIGTLDFPFDTYRSGQRTLAGSVYKTIAEGVNLFAKAPTGIGKTISTLFPAIKA
IGEGVVSRVYYVTARTTTRAAAEEAYAKMQTQGLHVHVVTLTAKDKICFKDENDCDAGAC
SMCEGYYDRINGAVSDILANETLMTRAVIEHYARKHRVCPFEFSLDVAYASDGIISDYNY
VFDPRISLKRLLEEHKRKGVVLVDEAHNLVERGREMFSAEMLKSPFLELKREFKLLSPET
AAAASAVNAHMITLRKLHADAGKAVEASAPQELLELLVPFVEAAERELVTRGSVSGAQHA
SSTGAAYAMLLDTYFAAQNMLRIAALYDERYVTYIRAGIEAGRSEVRVKLFCLDPSHLLG
QAIKGYRSTIYFSATLTPLAYYRDMLGAKEEDYTLQVPSPFHQEQWDVRLLPLSIRYRDR
ERSKGAIVNMLAGLAEERKGNILVFFPSYPYLREVYEEFMIRDVPADTLVQSPGMTEPER
DRFLEAFQPGQERTLLGFAVLGGVFAEGVDLPGDRLNGVVVVGVGLPQIGAERDVLREYF
AEQGRNGFNYAYVYPGMNKVLQAGGRLIRTEQDEGLLVLVDDRFAKEPYASLLPEEWRSY
RLVEQAGLGKEWTDYEF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaacgggtgatcgtatgaaggaagcaattcacatatcagtgcgtccacttgtg
gaatatgtgcatcggagcggtagcattcacagtggtttccgctccaacagcagtatgctg
gaaggaactcgcgtgcatcaggtaatccagaaaggctatagggagcatgaccgcaaagag
gtatatttgcgcacggaaattccatatcaggatgcattgtttattgtcgaaggccgctgt
gacgggttgattcagctggatggtgtatggacggttgatgagatcaagtcgatatctctg
cccctggaagaaattcagggggatggtcaacctgtacattgggcgcaagcgttcttatac
gcttatatgattgctcgtgaggagcagcatcataccatgcaggtacagcttacttatgta
caggcacacagtgaagacattcgccgatttaggcggcagctgtcctttgctgaactggaa
tcctttgcacaggagatgattgccggctatgcaccctatgcatttctgctgagagcgcat
gcggagaagcgggatgccagtattggcacgttggactttccctttgacacgtatcgttct
ggccagcggactctcgcgggttcggtgtacaaaacgattgctgaaggggtcaacctgttt
gccaaagcgcccacgggtatcggtaaaacaatatccaccttgtttcctgccatcaaggcc
atcggcgaaggggtggtgagccgggtatattatgtgacggctcgtaccacgacccgcgca
gcagcagaagaagcgtatgccaaaatgcagactcaagggctgcatgtgcacgtggtgacc
ttgactgcaaaggataaaatttgctttaaggatgaaaatgattgtgatgccggagcatgc
agcatgtgcgagggctattatgaccgaatcaacggtgcggtgtccgatattttagccaat
gagacattaatgactcgggcggtgattgagcattatgcgcgcaagcatagggtatgtccc
tttgaattttcactggatgtagcgtatgcctcggatggtataatcagtgattataactat
gttttcgacccgcgtatttctttgaagagattgctggaggagcacaagcgaaaaggcgtt
gtattggtggacgaggcgcataacctggtggaacgcggccgggaaatgttttcggcggaa
atgctgaagtcgccttttctggagctgaaaagggaatttaaactgctcagcccggagact
gccgcggctgcgagcgcagtgaacgcgcatatgattacgctgcgtaaattgcatgcggat
gcaggaaaagcagtggaggcgtccgcaccgcaagagttgctggagctgctggtgccattt
gtggaagcagccgaacgtgaactggtaacgaggggcagcgtgagcggtgcccagcatgcg
agcagtacaggtgcagcttatgcgatgcttctggatacgtactttgccgctcaaaatatg
ctgcgaattgccgcattgtacgatgaacgctacgttacctatattagagcgggtattgaa
gcgggacgcagtgaagtgcgggtcaagctattttgccttgatccttcgcatttgctcgga
caggctattaagggctatcgctcaactatatatttctccgcaacattgacgccgcttgct
tattaccgggacatgctgggagcgaaggaggaggactatacgctgcaggttccctctccc
ttccatcaggagcaatgggatgtacgtctattgccgctctctatccgttatcgggaccgc
gagcgctcaaagggagcgattgtgaatatgctggccggactggcagaggaacgtaaaggg
aacatcctcgtgtttttcccgtcctatccgtatctgcgtgaggtatacgaggagtttatg
attcgggatgtgccggcagatacgttggtgcaaagtccgggtatgaccgaaccggagcgc
gatcgctttctggaggcattccagcctggacaggagcgcaccttgctcggcttcgccgtg
ctgggtggtgtatttgccgaaggggtcgacttaccgggagatcgcttgaacggggtcgtg
gttgttggtgttggattgccgcaaatcggcgcagagcgggatgtgctgcgcgaatacttt
gcggagcaaggacggaacggctttaactatgcgtatgtataccctgggatgaataaagtc
cttcaggcaggaggcagacttatccgtacagagcaggacgaaggcctgctggttctggta
gatgatcgatttgccaaggagccgtatgcttctttgctgccggaggaatggaggagctat
cgtttggtggaacaagcgggattagggaaggaatggacagactatgaattttaa
DBGET
integrated database retrieval system
